RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 OR2AK2Q8NG84 335 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 ABRACLQ9P1F3 81 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 OR1A1Q9P1Q5 309 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 SLC23A1Q9UHI7 598 aa14.5□□□□□ -0.09
COL7A1-209ENST00000474432 SHISA3A0PJX4 238 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 G3V318 75 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 RRP9O43818 475 aaKnown RBP14.49□□□□□ -0.09
COL7A1-209ENST00000474432 ARL6IP5O75915 188 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 NDUFA3O95167 84 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 HLA-DRB1P01911 266 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 PSMA1P25786 263 aaKnown RBP14.49□□□□□ -0.09
COL7A1-209ENST00000474432 C5orf64Q2M2E5 130 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 PLAC9Q5JTB6 97 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 FAM71F2Q6NXP2 309 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 MOB1BQ7L9L4 216 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 ARHGAP5-AS1Q96IT6 56 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 CCDC90BQ9GZT6 254 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 KLK15Q9H2R5 256 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 PLGRKTQ9HBL7 147 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 CHMP1AQ9HD42 196 aaPredicted RBP14.49□□□□□ -0.09
COL7A1-209ENST00000474432 Q9N2K0 584 aa14.49□□□□□ -0.09
COL7A1-209ENST00000474432 IGKV1-6A0A0C4DH72 117 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 ITGB1BP1O14713 200 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 ATP6V0E1O15342 81 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 NBR2O15453 112 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 SCTP09683 121 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 SNRPBP14678 240 aaKnown RBP14.48□□□□□ -0.09
COL7A1-209ENST00000474432 VDAC1P21796 283 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 CALRP27797 417 aaKnown RBP14.48□□□□□ -0.09
COL7A1-209ENST00000474432 VEGFCP49767 419 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 NDPQ00604 133 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 RAB11BQ15907 218 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 C2orf76Q3KRA6 126 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 C19orf54Q5BKX5 351 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 FAM131AQ6UXB0 335 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 IZUMO2Q6UXV1 221 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 SETD6Q8TBK2 473 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 FAM3DQ96BQ1 224 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 ABHD14BQ96IU4 210 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 URM1Q9BTM9 101 aaKnown RBP14.48□□□□□ -0.09
COL7A1-209ENST00000474432 PECRQ9BY49 303 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 C11orf54Q9H0W9 315 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-209ENST00000474432 OR51J1Q9H342 316 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 RIMS4Q9H426 269 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-209ENST00000474432 STEAP1Q9UHE8 339 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 KCNK7Q9Y2U2 307 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 FBXO7Q9Y3I1 522 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 WSB1Q9Y6I7 421 aa14.48□□□□□ -0.09
COL7A1-209ENST00000474432 RAB29O14966 203 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 IGLV1-40P01703 118 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 HLA-DRB3P79483 266 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 FHL3Q13643 280 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 TBCEQ15813 527 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-209ENST00000474432 GLDNQ6ZMI3 551 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-209ENST00000474432 CHCHD6Q9BRQ6 235 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 MCRIP2Q9BUT9 160 aaKnown RBP14.47□□□□□ -0.09
COL7A1-209ENST00000474432 GPR61Q9BZJ8 451 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 PIPOXQ9P0Z9 390 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 V9GY05 133 aa14.47□□□□□ -0.09
COL7A1-209ENST00000474432 TMEM272A0A1B0GTI8 110 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 H0YJW9 148 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 ASPHD1Q5U4P2 390 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 LIN54Q6MZP7 749 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 CD200R1LQ6Q8B3 271 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 OR5AN1Q8NGI8 311 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 OR8U1Q8NH10 309 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 C4orf3Q8WVX3 66 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 PTX4Q96A99 478 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 CNBD2Q96M20 576 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 ACOT13Q9NPJ3 140 aa14.46□□□□□ -0.09
COL7A1-209ENST00000474432 FCN1O00602 326 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 OR5H8P0DN80 308 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 EGR2P11161 476 aaPredicted RBP14.45□□□□□ -0.1
COL7A1-209ENST00000474432 CEACAM6P40199 344 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 OR10A3P58181 314 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 LINC00205P59089 165 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 MOGAT2Q3SYC2 334 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 HES5Q5TA89 166 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 ZNF491Q8N8L2 437 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 MINDY2Q8NBR6 621 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 GNB4Q9HAV0 340 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 C12orf4Q9NQ89 552 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 PARP11Q9NR21 331 aa14.45□□□□□ -0.1
COL7A1-209ENST00000474432 TRAV41A0A0B4J266 112 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 I3L521 148 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 DENRO43583 198 aaKnown RBP14.44□□□□□ -0.1
COL7A1-209ENST00000474432 SOX15O60248 233 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 ZBTB25P24278 435 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 LUMP51884 338 aaPredicted RBP14.44□□□□□ -0.1
COL7A1-209ENST00000474432 CRIP2P52943 208 aaPredicted RBP14.44□□□□□ -0.1
COL7A1-209ENST00000474432 DEFB121Q5J5C9 76 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 ZNF367Q7RTV3 350 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 UBE2E2Q96LR5 201 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 CMSS1Q9BQ75 279 aaKnown RBP14.44□□□□□ -0.1
COL7A1-209ENST00000474432 FBXL15Q9H469 300 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 SCOCQ9UIL1 159 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 RNF150Q9ULK6 438 aa14.44□□□□□ -0.1
COL7A1-209ENST00000474432 TRAV1-2A0A0B4J238 106 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 OR5H14A6NHG9 310 aa14.43□□□□□ -0.1
COL7A1-209ENST00000474432 RRHO14718 337 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms