RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 HSD17B10Q99714 261 aaKnown RBP8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 SEC22CQ9BRL7 303 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 PCGF1Q9BSM1 259 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TMUB1Q9BVT8 246 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 REG4Q9BYZ8 158 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TOLLIPQ9H0E2 274 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 OR51J1Q9H342 316 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 C5orf66Q9H5L9 145 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 NAA60Q9H7X0 242 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 LRBAP50851 2863 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 TENM4Q6N022 2769 aa8.44□□□□□ -1.06
PRPF38A-202ENST00000474048 C3orf85A0A1B0GTC6 90 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 CRYM-AS1A6NIL9 109 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 M0R1X1 148 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 SFT2D2O95562 160 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 IFNA21P01568 189 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 APOA2P02652 100 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ARG1P05089 322 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 GNRHRP30968 328 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 GZMKP49863 264 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 MECP2P51608 486 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 LOXL3P58215 753 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 RND3P61587 244 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 DHODHQ02127 395 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 LOXL1Q08397 574 aaPredicted RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 DHRS2Q13268 280 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 PPP1R1AQ13522 171 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF66Q6ZN08 573 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 SLC25A48Q6ZT89 311 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 KCTD9Q7L273 389 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 VMO1Q7Z5L0 202 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF695Q8IW36 515 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 PNKDQ8N490 385 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 C12orf45Q8N5I9 185 aaPredicted RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 DRAM1Q8N682 238 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ADAD2Q8NCV1 583 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 BVESQ8NE79 360 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 CAPSLQ8WWF8 208 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 TMEM186Q96B77 213 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ABHD14BQ96IU4 210 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ADTRPQ96IZ2 230 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 FOXC2Q99958 501 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 PDCD10Q9BUL8 212 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 SIRT7Q9NRC8 400 aa8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 ANKRD17O75179 2603 aaKnown RBP8.43□□□□□ -1.06
PRPF38A-202ENST00000474048 HELZ2Q9BYK8 2649 aaKnown RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 A0A0A6YYJ9 748 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 IGHV2-26A0A0B4J1V2 119 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 A0A1W2PPE3 182 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 C9orf170A2RU37 121 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 FAM157AC9JC47 383 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 J3QR06 171 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 MPPED1O15442 326 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 TXNL1O43396 289 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 FCN3O75636 299 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 MMP23AO75900 390 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 DUS4LO95620 317 aaKnown RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 EPHA1P21709 976 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 PRTN3P24158 256 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 ZFP36P26651 326 aaKnown RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 KIR2DS2P43631 304 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 THBS3P49746 956 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 BCAP31P51572 246 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 DLX6P56179 175 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 RRAS2P62070 204 aaPredicted RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 RTL8BQ17RB0 113 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 ZNF626Q68DY1 528 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 LGI3Q8N145 548 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 TCTEX1D1Q8N7M0 179 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 C8orf31Q8N9H6 132 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 CD300LFQ8TDQ1 290 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 MRGPRFQ96AM1 343 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 RPEQ96AT9 228 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 RTBDNQ9BSG5 229 aaPredicted RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 PARP12Q9H0J9 701 aaKnown RBP8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 ITGB1BP2Q9UKP3 347 aa8.42□□□□□ -1.06
PRPF38A-202ENST00000474048 A0A087X0M5 115 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 SAA2-SAA4A0A096LPE2 208 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 A0A1B0GX30 115 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 C7orf66A4D0T2 115 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 FAM25EA8MYX2 175 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 H0Y980 276 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 PGLYRP1O75594 196 aaPredicted RBP8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 OR5AC1P0C628 307 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 SAA2P0DJI9 122 aaPredicted RBP8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 VSIG10L2P0DP72 767 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 F2RP25116 425 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 AKR1C2P52895 323 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 ERVK-16P61578 105 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 CT45A1Q5HYN5 189 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 FAM71F2Q6NXP2 309 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 TGIF2LXQ8IUE1 241 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 BEND2Q8NDZ0 799 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 OR52B4Q8NGK2 314 aa8.41□□□□□ -1.06
PRPF38A-202ENST00000474048 CT45A3Q8NHU0 189 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms