RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 ACSF3Q4G176 576 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 MIDNQ504T8 468 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF324BQ6AW86 544 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 SLC35E4Q6ICL7 350 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 Q6P435 159 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM122CQ6P4D5 195 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 Q6ZPA2 131 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 SSX8Q7RTT4 187 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM90A1Q86YD7 464 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 PRR18Q8N4B5 295 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CLEC18CQ8NCF0 446 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 OR52M1Q8NGK5 317 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 OR51H1Q8NH63 302 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM213BQ8TBF2 198 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 KLF14Q8TD94 323 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CD300LFQ8TDQ1 290 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF488Q96MN9 340 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CIB3Q96Q77 187 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 TAAR6Q96RI8 345 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ATP5SQ99766 215 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FGF23Q9GZV9 251 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ARV1Q9H2C2 271 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 KCNJ16Q9NPI9 418 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 PLSCR4Q9NRQ2 329 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF581Q9P0T4 197 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 IL36RNQ9UBH0 155 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 NDRG3Q9UGV2 375 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 MLXQ9UH92 298 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 RALYQ9UKM9 306 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 WIPI2Q9Y4P8 454 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 MED12Q93074 2177 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ASH1LQ9NR48 2969 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 PCSK5Q92824 1860 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GCN1Q92616 2671 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 IGKV1D-13A0A0B4J2D9 117 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 A0A1W2PR80 420 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM24AA6NFZ4 105 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 AGPAT2O15120 278 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TNFSF12O43508 249 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 RHBDL1O75783 438 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CEACAM4O75871 244 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TSPAN9O75954 239 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 IFNA1P01562 189 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 IGKV3-15P01624 115 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CRYAAP02489 173 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CECR9P0C854 216 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 IGKV1-13P0DP09 117 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CEACAM1P13688 526 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GYPEP15421 78 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 MUC1P15941 1255 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TNFSF4P23510 183 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CD80P33681 288 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CEACAM6P40199 344 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GABRA2P47869 451 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 SULT1A1P50225 295 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TAS2R30P59541 319 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 ERVK11-1P61568 191 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 POLR2GP62487 172 aaKnown RBP eCLIP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 RPP30P78346 268 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 AKR1C1Q04828 323 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 PSG7Q13046 419 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF154Q13106 437 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 HERPUD1Q15011 391 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GUSBP1Q15486 140 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GUK1Q16774 197 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 C3orf36Q3SXR2 165 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 KRTCAP3Q53RY4 240 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 NMSQ5H8A3 153 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 C10orf91Q5T1B1 145 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 C1orf185Q5T7R7 199 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 MBNL2Q5VZF2 373 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 PCSK4Q6UW60 755 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM180AQ6UWF9 173 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 BTNL8Q6UX41 500 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 IGFL3Q6UXB1 125 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 ACP7Q6ZNF0 438 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TMEM182Q6ZP80 229 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TMEM252Q8N6L7 170 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF645Q8N7E2 425 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 C9orf106Q8NAJ2 232 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 PRSS33Q8NF86 280 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 OR5C1Q8NGR4 320 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 OR10Z1Q8NGY1 313 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 ERGIC1Q969X5 290 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 RBMXL1Q96E39 390 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 DMRTA2Q96SC8 542 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 HSD17B10Q99714 261 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 MS4A7Q9GZW8 240 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 SMCO4Q9NRQ5 59 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 PSENENQ9NZ42 101 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 TINAGQ9UJW2 476 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 PPP1R3CQ9UQK1 317 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 WSB1Q9Y6I7 421 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 CACNA1HO95180 2353 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 GVINP1Q7Z2Y8 2422 aa4.94□□□□□ -1.62
ATPAF1-204ENST00000474020 NCKAP5O14513 1909 aa4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 TNRC6AQ8NDV7 1962 aaKnown RBP4.93□□□□□ -1.62
ATPAF1-204ENST00000474020 IGKV1-6A0A0C4DH72 117 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms