RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ERVS71-1P61550 626 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 CLN3Q13286 438 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 ABHD17BQ5VST6 288 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 UBE2L5PA0A1B0GUS4 154 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 ALKBH6Q3KRA9 238 aa17.84■□□□□ 0.45
COL18A1-207ENST00000473212 WDR25Q64LD2 544 aaPredicted RBP17.84■□□□□ 0.45
COL18A1-207ENST00000473212 TRBV24-1A0A075B6N3 115 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 ZNF737O75373 536 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 IL18BPO95998 194 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 OPN1MWP04001 364 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 CD55P08174 381 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 OPN1MW2P0DN77 364 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 OPN1MW3P0DN78 364 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 PLP2Q04941 152 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 OR8G2PQ6IF36 304 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 Q6P435 159 aa17.83■□□□□ 0.45
COL18A1-207ENST00000473212 OR5B21A6NL26 309 aa17.83■□□□□ 0.44
COL18A1-207ENST00000473212 WNT2P09544 360 aa17.83■□□□□ 0.44
COL18A1-207ENST00000473212 ARR3P36575 388 aa17.83■□□□□ 0.44
COL18A1-207ENST00000473212 CEBPDP49716 269 aaPredicted RBP17.83■□□□□ 0.44
COL18A1-207ENST00000473212 ADIRFQ15847 76 aa17.83■□□□□ 0.44
COL18A1-207ENST00000473212 MPC1Q9Y5U8 109 aa17.83■□□□□ 0.44
COL18A1-207ENST00000473212 LRP5LA4QPB2 252 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 PLGLB1Q02325 96 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 TAF15Q92804 592 aaKnown RBP eCLIP17.82■□□□□ 0.44
COL18A1-207ENST00000473212 LHX4Q969G2 390 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 PACRGQ96M98 296 aaPredicted RBP17.82■□□□□ 0.44
COL18A1-207ENST00000473212 OR51I2Q9H344 312 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 TMEM9BQ9NQ34 198 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 SLC39A9Q9NUM3 307 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 TRAPPC2LQ9UL33 140 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 NPIPB11E5RHQ5 1161 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 HMGB3O15347 200 aaKnown RBP17.82■□□□□ 0.44
COL18A1-207ENST00000473212 TGOLN2O43493 480 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 IFNA1P01562 189 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 IGKV1D-33P01593 117 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 IGKV1-33P01594 117 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 TFF1P04155 84 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 SLC38A11Q08AI6 406 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 MDP1Q86V88 176 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 SMIM7Q9BQ49 75 aa17.82■□□□□ 0.44
COL18A1-207ENST00000473212 LIN7CQ9NUP9 197 aaKnown RBP17.82■□□□□ 0.44
COL18A1-207ENST00000473212 CD81P60033 236 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 UBALD2Q8IYN6 164 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 RPP25LQ8N5L8 163 aaKnown RBP17.81■□□□□ 0.44
COL18A1-207ENST00000473212 NECAP1Q8NC96 275 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 PINX1Q96BK5 328 aaKnown RBP17.81■□□□□ 0.44
COL18A1-207ENST00000473212 HIST1H2BLQ99880 126 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 IL17BQ9UHF5 180 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 ACSF3Q4G176 576 aaPredicted RBP17.81■□□□□ 0.44
COL18A1-207ENST00000473212 SPRY4Q9C004 299 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 CTDSP1Q9GZU7 261 aa17.81■□□□□ 0.44
COL18A1-207ENST00000473212 ACP1P24666 158 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 APLNRP35414 380 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 NCR3LG1Q68D85 454 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 C16orf82Q7Z2V1 217 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 FGFRL1Q8N441 504 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 OR10A7Q8NGE5 316 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 OR4X1Q8NH49 305 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 C14orf144Q96I85 54 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 PKIBQ9C010 78 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 DEFB127Q9H1M4 99 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 PRO1933Q9H354 126 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 CDH20Q9HBT6 801 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 B4GALT7Q9UBV7 327 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 NAT8Q9UHE5 227 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 CLDN1O95832 211 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 OR2H2O95918 312 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 CEACAM6P40199 344 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 ATP1A1-AS1Q5TC04 95 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 DRAM1Q8N682 238 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 LAMA5O15230 3695 aa17.8■□□□□ 0.44
COL18A1-207ENST00000473212 RPS16P62249 146 aaKnown RBP17.79■□□□□ 0.44
COL18A1-207ENST00000473212 DCAF10Q5QP82 559 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 ZNF497Q6ZNH5 498 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 RPUSD4Q96CM3 377 aaKnown RBP17.79■□□□□ 0.44
COL18A1-207ENST00000473212 GUCD1Q96NT3 240 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 PITPNC1Q9UKF7 332 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 GAB2Q9UQC2 676 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 J3QT63 122 aa17.79■□□□□ 0.44
COL18A1-207ENST00000473212 MEF2BQ02080 365 aaPredicted RBP17.79■□□□□ 0.44
COL18A1-207ENST00000473212 SMCO3A2RU48 225 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 TMEM241Q24JQ0 296 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.78■□□□□ 0.44
COL18A1-207ENST00000473212 C1orf210Q8IVY1 113 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 SLC25A22Q9H936 323 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 UFSP2Q9NUQ7 469 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 CDIPTO14735 213 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 TUBG1P23258 451 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 MEOX1P50221 254 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 ACSM6Q6P461 480 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 UNQ6494/PRO21346Q6UXR6 183 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 MOB1BQ7L9L4 216 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 MCEMP1Q8IX19 187 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 SCCPDHQ8NBX0 429 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 PARD6GQ9BYG4 376 aaPredicted RBP17.78■□□□□ 0.44
COL18A1-207ENST00000473212 STRADBQ9C0K7 418 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 OR2J1Q9GZK6 312 aa17.78■□□□□ 0.44
COL18A1-207ENST00000473212 IL2RGP31785 369 aa17.77■□□□□ 0.44
COL18A1-207ENST00000473212 TMEM14EPQ6UXP3 125 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms