RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ITGB1BP1O14713 200 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 RAB29O14966 203 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 ST8SIA5O15466 376 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 NDUFA3O95167 84 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 DCTN2Q13561 401 aaKnown RBP11.92□□□□□ -0.5
VTI1A-203ENST00000472892 C5orf64Q2M2E5 130 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 NRG4Q8WWG1 115 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 UBE2E2Q96LR5 201 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 GFI1Q99684 422 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 B9D2Q9BPU9 175 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 GHITMQ9H3K2 345 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 CHMP1AQ9HD42 196 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-203ENST00000472892 ISYNA1Q9NPH2 558 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 TPRKBQ9Y3C4 175 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 WSB1Q9Y6I7 421 aa11.92□□□□□ -0.5
VTI1A-203ENST00000472892 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-203ENST00000472892 SLC17A2O00624 439 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 ATP6V0E1O15342 81 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 SOCS1O15524 211 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 ARSBP15848 533 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 LUMP51884 338 aaPredicted RBP11.91□□□□□ -0.5
VTI1A-203ENST00000472892 AQP4P55087 323 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 RUNX1Q01196 453 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 CD69Q07108 199 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 TRAM1Q15629 374 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 C9orf66Q5T8R8 295 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 C11orf87Q6NUJ2 197 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 TMEM65Q6PI78 240 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 MOB1BQ7L9L4 216 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 ZNF491Q8N8L2 437 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 MINDY2Q8NBR6 621 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 OR11H1Q8NG94 326 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 AGMATQ9BSE5 352 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
VTI1A-203ENST00000472892 AK3Q9UIJ7 227 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 SCOCQ9UIL1 159 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 HSF4Q9ULV5 492 aa11.91□□□□□ -0.5
VTI1A-203ENST00000472892 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 I3L521 148 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 RGS10O43665 173 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 PSMA1P25786 263 aaKnown RBP11.9□□□□□ -0.5
VTI1A-203ENST00000472892 MC5RP33032 325 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 RAB9AP51151 201 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 TMEM50BP56557 158 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 RPS25P62851 125 aaKnown RBP11.9□□□□□ -0.5
VTI1A-203ENST00000472892 P2RY14Q15391 338 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 RPL39P5Q59GN2 51 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 SETD6Q8TBK2 473 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 PARP12Q9H0J9 701 aaKnown RBP11.9□□□□□ -0.5
VTI1A-203ENST00000472892 GNB4Q9HAV0 340 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 PLGRKTQ9HBL7 147 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 PARP11Q9NR21 331 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 KIAA1456Q9P272 454 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 MGAT4AQ9UM21 535 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 VSIG4Q9Y279 399 aa11.9□□□□□ -0.5
VTI1A-203ENST00000472892 AK6Q9Y3D8 172 aaKnown RBP11.9□□□□□ -0.5
VTI1A-203ENST00000472892 OR5H14A6NHG9 310 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 SEC14L6B5MCN3 397 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 HSMCR30P0CW71 290 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 CPEP16870 476 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 ZBTB25P24278 435 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 CEACAM6P40199 344 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 CRIP2P52943 208 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 MLLT11Q13015 90 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 C19orf54Q5BKX5 351 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 ZNF660Q6AZW8 331 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 FAM131AQ6UXB0 335 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 OR1N2Q8NGR9 330 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 PTX4Q96A99 478 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 RNF5Q99942 180 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 C11orf54Q9H0W9 315 aaPredicted RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 Q9N2K0 584 aa11.89□□□□□ -0.51
VTI1A-203ENST00000472892 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
VTI1A-203ENST00000472892 H0YJW9 148 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 FCN1O00602 326 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 RRHO14718 337 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 PROP1O75360 226 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 SCTP09683 121 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 CRHBPP24387 322 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 CX3CL1P78423 397 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 RAB11BQ15907 218 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 GLDNQ6ZMI3 551 aaPredicted RBP11.88□□□□□ -0.51
VTI1A-203ENST00000472892 PRSS48Q7RTY5 328 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 EDARADDQ8WWZ3 215 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 ARHGAP5-AS1Q96IT6 56 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 OR1A1Q9P1Q5 309 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 FBXO7Q9Y3I1 522 aa11.88□□□□□ -0.51
VTI1A-203ENST00000472892 LDLRAD4O15165 306 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 RBBP9O75884 186 aa11.87□□□□□ -0.51
VTI1A-203ENST00000472892 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms