RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CHMP1AQ9HD42 196 aaPredicted RBP7.73□□□□□ -1.17
SCAMP3-205ENST00000472397 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
SCAMP3-205ENST00000472397 CNOT2Q9NZN8 540 aaKnown RBP7.73□□□□□ -1.17
SCAMP3-205ENST00000472397 METTL1Q9UBP6 276 aaKnown RBP7.73□□□□□ -1.17
SCAMP3-205ENST00000472397 NUBP2Q9Y5Y2 271 aa7.73□□□□□ -1.17
SCAMP3-205ENST00000472397 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 LOC100130705A0A1B0GUX0 176 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 TRBV12-3P01733 135 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 CT45A6P0DMU7 189 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 CT45A5P0DMU8 189 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 CT45A7P0DMV0 189 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 SYNJ2BPP57105 145 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 RPS11P62280 158 aaKnown RBP eCLIP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 RAB40BQ12829 278 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 DYRK1AQ13627 763 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 INSL4Q14641 139 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 DMKNQ6E0U4 476 aaPredicted RBP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 C6orf201Q7Z4U5 140 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 NPBQ8NG41 125 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 FLYWCH2Q96CP2 140 aaKnown RBP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 Q96MT0 163 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 HDHD3Q9BSH5 251 aaPredicted RBP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 ELOVL1Q9BW60 279 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 CST11Q9H112 138 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 IFI27L2Q9H2X8 130 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 PAK1IP1Q9NWT1 392 aaPredicted RBP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 OR1A1Q9P1Q5 309 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 ERGIC3Q9Y282 383 aa7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 RPL36Q9Y3U8 105 aaKnown RBP7.72□□□□□ -1.17
SCAMP3-205ENST00000472397 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.17
SCAMP3-205ENST00000472397 TRBV5-5A0A0J9YX44 114 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 H0YJW9 148 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 ARPC1BO15143 372 aaKnown RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 OGG1O15527 345 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 ZNF780AO75290 641 aaPredicted RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 WBP4O75554 376 aaKnown RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 NDUFA3O95167 84 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 IGLV1-51P01701 117 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 EDN2P20800 178 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 FUT3P21217 361 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 PJVKQ0ZLH3 352 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 MRPL28Q13084 256 aaKnown RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 PSG5Q15238 335 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 ZNF660Q6AZW8 331 aaPredicted RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 TMPRSS11AQ6ZMR5 421 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 OR2AK2Q8NG84 335 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 Q96M66 194 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 SPATA25Q9BR10 227 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 NICN1Q9BSH3 213 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 FGF20Q9NP95 211 aaPredicted RBP7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 BABAM2Q9NXR7 383 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 JPT1Q9UK76 154 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 STUB1Q9UNE7 303 aa7.71□□□□□ -1.18
SCAMP3-205ENST00000472397 C13orf42A0A1B0GVH6 325 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 HSPA12AO43301 675 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 SLC25A17O43808 307 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 YPEL1O60688 119 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 BRI3O95415 125 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 RPS16P62249 146 aaKnown RBP7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 GPR176Q14439 515 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 Q3ZCU0 254 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 Q499Y3 187 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 TRAT1Q6PIZ9 186 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 IL34Q6ZMJ4 242 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 GAPTQ8N292 157 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 GALMQ96C23 342 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 SMIM19Q96E16 107 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 YPEL2Q96QA6 119 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 SPACA1Q9HBV2 294 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 MBNL3Q9NUK0 354 aaKnown RBP7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 CKLFQ9UBR5 152 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 ZNF580Q9UK33 172 aa7.7□□□□□ -1.18
SCAMP3-205ENST00000472397 TNCP24821 2201 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 TRBV5-7A0A0A0MS05 114 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 PDCD6O75340 191 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 RBMXL2O75526 392 aaKnown RBP7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 JTBO76095 146 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 CNIH1O95406 144 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 PRH1P02810 166 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 IGKV1-16P04430 117 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 CPEP16870 476 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 HTR2CP28335 458 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 CAPGP40121 348 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 TMEM267Q0VDI3 215 aaPredicted RBP7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 FXYD3Q14802 87 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 HMGN3Q15651 99 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 PGLYRP3Q96LB9 341 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 MYCBPQ99417 103 aaPredicted RBP7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 S100A14Q9HCY8 104 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 RAB9BQ9NP90 201 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 MRPS18AQ9NVS2 196 aaKnown RBP7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 STEAP1Q9UHE8 339 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 SLC23A1Q9UHI7 598 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 WASHC3Q9Y3C0 194 aa7.69□□□□□ -1.18
SCAMP3-205ENST00000472397 PROP1O75360 226 aa7.68□□□□□ -1.18
SCAMP3-205ENST00000472397 SC5DO75845 299 aa7.68□□□□□ -1.18
SCAMP3-205ENST00000472397 RGS11O94810 467 aa7.68□□□□□ -1.18
SCAMP3-205ENST00000472397 IFNA6P05013 189 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms