RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 STK16O75716 305 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 LY6HO94772 140 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 CD7P09564 240 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 P0DMU3 169 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 FAM231AP0DMU4 169 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 FAM231CP0DMU5 169 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 ADORA1P30542 326 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 PPP1CCP36873 323 aaKnown RBP1.47□□□□□ -2.17
PTCD3-209ENST00000472044 HSPA9P38646 679 aaKnown RBP1.47□□□□□ -2.17
PTCD3-209ENST00000472044 CD151P48509 253 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 H2BFSP57053 126 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 TSPEAR-AS2P59090 65 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 DAD1P61803 113 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 SS18Q15532 418 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 PCOTHQ58A44 107 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 SPATA31B1PQ5VZV4 182 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 OR10A6Q8NH74 314 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 TMBIM1Q969X1 311 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 OR7D2Q96RA2 312 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 TBX5Q99593 518 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 BBS2Q9BXC9 721 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 CDCA4Q9BXL8 241 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 EIF5A2Q9GZV4 153 aaKnown RBP1.47□□□□□ -2.17
PTCD3-209ENST00000472044 WDR54Q9H977 334 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 HHLA2Q9UM44 414 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 TP53TG1Q9Y2A0 90 aa1.47□□□□□ -2.17
PTCD3-209ENST00000472044 THSD7AQ9UPZ6 1657 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 MUC21A0A0G2JKD1 596 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 MUC21A0A140T8X8 626 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 LINC00854A0A1B0GVQ3 168 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 A0A1W2PQL4 384 aaPredicted RBP1.46□□□□□ -2.18
PTCD3-209ENST00000472044 DAPL1A0PJW8 107 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 COPEO14579 308 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 TRAPPC3O43617 180 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 ARL6IP5O75915 188 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 SOD1P00441 154 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 HBZP02008 142 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 CRYBA1P05813 215 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 OR13C7P0DN81 318 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 ESDP10768 282 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 SLC25A16P16260 332 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 NPPCP23582 126 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 CRATP43155 626 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 KRTAP12-1P59990 96 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 ACTBP60709 375 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 ACTG1P63261 375 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 C4orf26Q17RF5 130 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 RASL11AQ6T310 242 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 FNDC9Q8TBE3 224 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 TLCD1Q96CP7 247 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 MBOAT7Q96N66 472 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 TMEM208Q9BTX3 173 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 ZNF426Q9BUY5 554 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 NDEL1Q9GZM8 345 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 OR51B6Q9H340 312 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 TXNL4BQ9NX01 149 aaKnown RBP1.46□□□□□ -2.18
PTCD3-209ENST00000472044 MINOS1-NBL1R4GNA1 71 aa1.46□□□□□ -2.18
PTCD3-209ENST00000472044 MDC1Q14676 2089 aaKnown RBP1.46□□□□□ -2.18
PTCD3-209ENST00000472044 IGHV3-73A0A0B4J1V6 119 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 GRIFINA4D1Z8 144 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 C19orf71A6NCJ1 209 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 ERICH4A6NGS2 130 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 CCRL2O00421 344 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 CASQ1P31415 396 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 TBC1D28Q2M2D7 210 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 MESTQ5EB52 335 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 LCN8Q6JVE9 175 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 CCDC121Q6ZUS5 278 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 CCDC112Q8NEF3 446 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 C16orf78Q8WTQ4 265 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 PPCDCQ96CD2 204 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 MGLLQ99685 303 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 TXNDC17Q9BRA2 123 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 TTTY12Q9BZ98 90 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 CFAP45Q9UL16 551 aa1.45□□□□□ -2.18
PTCD3-209ENST00000472044 PUS1Q9Y606 427 aaKnown RBP eCLIP1.45□□□□□ -2.18
PTCD3-209ENST00000472044 NCKAP5O14513 1909 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 PLCH2O75038 1416 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 METTL15A6NJ78 407 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 UBFD1O14562 309 aaKnown RBP1.44□□□□□ -2.18
PTCD3-209ENST00000472044 OVOL1O14753 267 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 CALUO43852 315 aaPredicted RBP1.44□□□□□ -2.18
PTCD3-209ENST00000472044 PET100P0DJ07 73 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 IFI30P13284 250 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 CD99P14209 185 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 CRHBPP24387 322 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 MIPP30301 263 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 DAPP51397 102 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 HLA-DRB5Q30154 266 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 SDHAF4Q5VUM1 108 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 Q9BRP9 147 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 ZNF471Q9BX82 626 aaPredicted RBP1.44□□□□□ -2.18
PTCD3-209ENST00000472044 PARVAQ9NVD7 372 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 FAM206AQ9NX38 181 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 SNX12Q9UMY4 172 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 PSMD13Q9UNM6 376 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 SCN9AQ15858 1988 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 PIK3R4Q99570 1358 aa1.44□□□□□ -2.18
PTCD3-209ENST00000472044 VPS37CA5D8V6 355 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-209ENST00000472044 GOLGA6L10A6NI86 522 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms