RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ITGB1BP1O14713 200 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 IGLV2-14P01704 120 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 ARG1P05089 322 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 IGHV4-38-2P0DP08 117 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 PGAM2P15259 253 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 KLF17Q5JT82 389 aaPredicted RBP15.61■□□□□ 0.09
PSPC1-203ENST00000471658 CSPG4Q6UVK1 2322 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 ODF3L1Q8IXM7 274 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 LYG1Q8N1E2 194 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 ZNF596Q8TC21 504 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 GPHA2Q96T91 129 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 KCNS2Q9ULS6 477 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 VSIG4Q9Y279 399 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 ODF3BA8MYP8 253 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 J3QLI3 93 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 PROP1O75360 226 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 NDUFB6O95139 128 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 TCRBP04435 133 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 GNRHRP30968 328 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 PRRX1P54821 245 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 DIAPH2-AS1Q14236 149 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 HLA-DRB5Q30154 266 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 Q3ZCU0 254 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 RPL39P5Q59GN2 51 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 RUSC1-AS1Q66K80 236 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 NCR3LG1Q68D85 454 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 ZNF626Q68DY1 528 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 LINC00311Q8N616 119 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 C8orf31Q8N9H6 132 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 OR4P4Q8NGL7 312 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 ENKURQ8TC29 256 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 TMUB1Q9BVT8 246 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 MMP28Q9H239 520 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 DPAGT1Q9H3H5 408 aa15.6■□□□□ 0.09
PSPC1-203ENST00000471658 TRAV40A0A0B4J280 105 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 CD5LO43866 347 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 UBE2E1P51965 193 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 ZNF818PQ6ZRF7 136 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 LHFPL4Q7Z7J7 247 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 OR10X1Q8NGY0 326 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 GPR132Q9UNW8 380 aa15.59■□□□□ 0.09
PSPC1-203ENST00000471658 PAX6P26367 422 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 RAB7AP51149 207 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 UCP3P55916 312 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 LINC00205P59089 165 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 RBMS2Q15434 407 aaKnown RBP15.58■□□□□ 0.09
PSPC1-203ENST00000471658 RGS21Q2M5E4 152 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 PHLDA2Q53GA4 152 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 DRAM1Q8N682 238 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 BEND2Q8NDZ0 799 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 C17orf50Q8WW18 174 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 ZNF251Q9BRH9 671 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 RTBDNQ9BSG5 229 aaPredicted RBP15.58■□□□□ 0.09
PSPC1-203ENST00000471658 RSRP1Q9BUV0 290 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 YAE1D1Q9NRH1 226 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 SDHAF2Q9NX18 166 aa15.58■□□□□ 0.09
PSPC1-203ENST00000471658 SOX21Q9Y651 276 aaPredicted RBP15.58■□□□□ 0.09
PSPC1-203ENST00000471658 TRAV6A0A075B6T7 132 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 SAA2-SAA4A0A096LPE2 208 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 BUB1B-PAK6H3BSN5 160 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 SAA2P0DJI9 122 aaPredicted RBP15.57■□□□□ 0.08
PSPC1-203ENST00000471658 CD99P14209 185 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 GPR12P47775 334 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 BRD3OSQ6XYD6 125 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 ZNF645Q8N7E2 425 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 ADAD2Q8NCV1 583 aaKnown RBP15.57■□□□□ 0.08
PSPC1-203ENST00000471658 DUSP18Q8NEJ0 188 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 RBMXL1Q96E39 390 aaKnown RBP15.57■□□□□ 0.08
PSPC1-203ENST00000471658 SLC25A21Q9BQT8 299 aaPredicted RBP15.57■□□□□ 0.08
PSPC1-203ENST00000471658 C5orf66Q9H5L9 145 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 ZNF221Q9UK13 617 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 IGHV1-69DA0A0B4J2H0 117 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 ARPC1BO15143 372 aaKnown RBP15.57■□□□□ 0.08
PSPC1-203ENST00000471658 TNFSF12O43508 249 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 LY6G6DO95868 133 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 PTTG1O95997 202 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 IGHV1-69P01742 117 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 REG1BP48304 166 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 SLC38A6Q8IZM9 456 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 ST6GALNAC6Q969X2 333 aa15.57■□□□□ 0.08
PSPC1-203ENST00000471658 RAB29O14966 203 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 NPFFO15130 113 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 RAB25P57735 213 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 IL17RELQ6ZVW7 336 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 TMED4Q7Z7H5 227 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 DRAXINQ8NBI3 349 aaPredicted RBP15.56■□□□□ 0.08
PSPC1-203ENST00000471658 AJUBAQ96IF1 538 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 BEX2Q9BXY8 128 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 C20orf85Q9H1P6 137 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 BEX1Q9HBH7 125 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 NUDT15Q9NV35 164 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 PIPOXQ9P0Z9 390 aa15.56■□□□□ 0.08
PSPC1-203ENST00000471658 ANK3Q12955 4377 aaKnown RBP15.56■□□□□ 0.08
PSPC1-203ENST00000471658 LY6LH3BQJ8 138 aa15.55■□□□□ 0.08
PSPC1-203ENST00000471658 RLN1P04808 185 aa15.55■□□□□ 0.08
PSPC1-203ENST00000471658 CTSDP07339 412 aaPredicted RBP15.55■□□□□ 0.08
PSPC1-203ENST00000471658 HTR1DP28221 377 aa15.55■□□□□ 0.08
PSPC1-203ENST00000471658 GPR157Q5UAW9 335 aa15.55■□□□□ 0.08
PSPC1-203ENST00000471658 LPCAT3Q6P1A2 487 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms