RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 PRSS22Q9GZN4 317 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 C11orf54Q9H0W9 315 aaPredicted RBP12.23□□□□□ -0.45
SDC3-203ENST00000471567 AUNIPQ9H7T9 357 aa12.23□□□□□ -0.45
SDC3-203ENST00000471567 ST8SIA5O15466 376 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 SSX5O60225 188 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 APOA1P02647 267 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 PROK1P58294 105 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 IGSF11Q5DX21 431 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 MZT2AQ6P582 158 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 ZNF833PQ6ZTB9 187 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 OR2T6Q8NHC8 308 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 MAFIPQ8WZ33 124 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 S1PR3Q99500 378 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 PARP12Q9H0J9 701 aaKnown RBP12.22□□□□□ -0.45
SDC3-203ENST00000471567 RDH8Q9NYR8 311 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 COMMD3Q9UBI1 195 aa12.22□□□□□ -0.45
SDC3-203ENST00000471567 DNHD1Q96M86 4753 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 IGKV1D-8A0A087WSZ0 117 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 SAA2-SAA4A0A096LPE2 208 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 BET1O15155 118 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 SAA2P0DJI9 122 aaPredicted RBP12.21□□□□□ -0.45
SDC3-203ENST00000471567 TMEM11P17152 192 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 CBX5P45973 191 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 HES1Q14469 280 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 OR2T10Q8NGZ9 312 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 ZNF702PQ9H963 129 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 MOB4Q9Y3A3 225 aa12.21□□□□□ -0.45
SDC3-203ENST00000471567 TENM1Q9UKZ4 2725 aa12.21□□□□□ -0.46
SDC3-203ENST00000471567 IGHV3-72A0A0B4J1Y9 119 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
SDC3-203ENST00000471567 SOX6P35712 828 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 OR3A3P47888 321 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 BLCAPP62952 87 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 LSAMPQ13449 338 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 SPCS2Q15005 226 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 FBLN7Q53RD9 439 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 TMEM69Q5SWH9 247 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 CNIH2Q6PI25 160 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 EAF1Q96JC9 268 aaPredicted RBP12.2□□□□□ -0.46
SDC3-203ENST00000471567 NABP2Q9BQ15 211 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 ZNF251Q9BRH9 671 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 GINS4Q9BRT9 223 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 ANXA10Q9UJ72 324 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 ZNF221Q9UK13 617 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 GAB2Q9UQC2 676 aa12.2□□□□□ -0.46
SDC3-203ENST00000471567 SMIM31A0A1B0GVY4 71 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 FGF16O43320 207 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 MOSP00540 346 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 EIF4EP06730 217 aaKnown RBP12.19□□□□□ -0.46
SDC3-203ENST00000471567 TAS2R20P59543 309 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 HNF4GQ14541 408 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 HOGA1Q86XE5 327 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
SDC3-203ENST00000471567 Q8N6K4 173 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.19□□□□□ -0.46
SDC3-203ENST00000471567 OR8H1Q8NGG4 311 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 ABHD14BQ96IU4 210 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
SDC3-203ENST00000471567 SIGLEC9Q9Y336 463 aa12.19□□□□□ -0.46
SDC3-203ENST00000471567 ZNF736B4DX44 427 aaPredicted RBP12.18□□□□□ -0.46
SDC3-203ENST00000471567 HAX1O00165 279 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 HPGDSO60760 199 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 AMY1AP04745 511 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 AMY2AP04746 511 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 GPR12P47775 334 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 RPL39P5Q59GN2 51 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 BEST4Q8NFU0 473 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 RNF150Q9ULK6 438 aa12.18□□□□□ -0.46
SDC3-203ENST00000471567 HLA-DQB1P01920 261 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 OR8U9P0C7N5 309 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 CT45A6P0DMU7 189 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 CT45A5P0DMU8 189 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 CT45A7P0DMV0 189 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 PTHLHP12272 177 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 ELK1P19419 428 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 MC5RP33032 325 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 PRSS3P35030 304 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 ABCA11PQ4W5N1 156 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 Q6ZS46 218 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 C5orf56Q8N8D9 126 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 OR8U1Q8NH10 309 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 DYNC2LI1Q8TCX1 351 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 ISOC1Q96CN7 298 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 CITED1Q99966 193 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 SERTAD4Q9NUC0 356 aa12.17□□□□□ -0.46
SDC3-203ENST00000471567 OR5H14A6NHG9 310 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 H3BMQ9 156 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 PROP1O75360 226 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 TPPPO94811 219 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 VDAC2P45880 294 aaPredicted RBP12.16□□□□□ -0.46
SDC3-203ENST00000471567 ARPC4P59998 168 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 ARSJQ5FYB0 599 aaPredicted RBP12.16□□□□□ -0.46
SDC3-203ENST00000471567 GVQW1Q8N7I0 195 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 OR5AN1Q8NGI8 311 aa12.16□□□□□ -0.46
SDC3-203ENST00000471567 PLSCR3Q9NRY6 295 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms