RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TMEM50BP56557 158 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 NDPQ00604 133 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 MLLT11Q13015 90 aaPredicted RBP12□□□□□ -0.49
COL1A1-203ENST00000471344 TRAM1Q15629 374 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 CXorf66Q5JRM2 361 aaPredicted RBP12□□□□□ -0.49
COL1A1-203ENST00000471344 FAM131AQ6UXB0 335 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 ABHD14BQ96IU4 210 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 KLK15Q9H2R5 256 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 ABRACLQ9P1F3 81 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 BLOC1S6Q9UL45 172 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 LRRC42Q9Y546 428 aa12□□□□□ -0.49
COL1A1-203ENST00000471344 IGHV7-81A0A0B4J1V7 117 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 ATP6V0E1O15342 81 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 RGS11O94810 467 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 IGF1P05019 195 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 PSMB8P28062 276 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 VEGFCP49767 419 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 LUMP51884 338 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-203ENST00000471344 HLA-DRB3P79483 266 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 RAB11BQ15907 218 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 LY6G6FQ5SQ64 297 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF367Q7RTV3 350 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 FAM89BQ8N5H3 189 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 ARHGAP5-AS1Q96IT6 56 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 FBXO7Q9Y3I1 522 aa11.99□□□□□ -0.49
COL1A1-203ENST00000471344 SHISA3A0PJX4 238 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 NBR2O15453 112 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 ELANEP08246 267 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 SCTP09683 121 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 CT45A6P0DMU7 189 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 CT45A5P0DMU8 189 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 CT45A7P0DMV0 189 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 SLC6A1P30531 599 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 CDX1P47902 265 aaPredicted RBP11.98□□□□□ -0.49
COL1A1-203ENST00000471344 LINC00205P59089 165 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 C5orf64Q2M2E5 130 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 DEFB121Q5J5C9 76 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 PLAC9Q5JTB6 97 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 HES5Q5TA89 166 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 C11orf87Q6NUJ2 197 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 GON7Q9BXV9 100 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 PECRQ9BY49 303 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 GNB4Q9HAV0 340 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 STEAP1Q9UHE8 339 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 SLC23A1Q9UHI7 598 aa11.98□□□□□ -0.49
COL1A1-203ENST00000471344 TRBV6-6A0A0A6YYG2 114 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 IGKV1-6A0A0C4DH72 117 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 LDLRAD4O15165 306 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 ARL6IP5O75915 188 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 NDUFA3O95167 84 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 PPIFP30405 207 aaKnown RBP11.97□□□□□ -0.49
COL1A1-203ENST00000471344 OR10A3P58181 314 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 KIAA0141Q14154 515 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-203ENST00000471344 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 UBE2UQ5VVX9 321 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF773Q6PK81 442 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 MOB1BQ7L9L4 216 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-203ENST00000471344 NPBQ8NG41 125 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 OR8U1Q8NH10 309 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 MYOZ3Q8TDC0 251 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 FAM3DQ96BQ1 224 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 OR5B12Q96R08 314 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 AGMATQ9BSE5 352 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 URM1Q9BTM9 101 aaKnown RBP11.97□□□□□ -0.49
COL1A1-203ENST00000471344 C11orf54Q9H0W9 315 aaPredicted RBP11.97□□□□□ -0.49
COL1A1-203ENST00000471344 OR51J1Q9H342 316 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 FBXL15Q9H469 300 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 Q9N2K0 584 aa11.97□□□□□ -0.49
COL1A1-203ENST00000471344 A0A0B4J203 849 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 TMEM272A0A1B0GTI8 110 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 H0YJW9 148 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 FCN1O00602 326 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 PROP1O75360 226 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 RANBP1P43487 201 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 C2orf76Q3KRA6 126 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 ASPHD1Q5U4P2 390 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 C4orf3Q8WVX3 66 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 DPF1Q92782 380 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 YTHDF1Q9BYJ9 559 aaKnown RBP11.96□□□□□ -0.49
COL1A1-203ENST00000471344 RIMS4Q9H426 269 aaPredicted RBP11.96□□□□□ -0.49
COL1A1-203ENST00000471344 C12orf4Q9NQ89 552 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 ZNF580Q9UK33 172 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 RNF150Q9ULK6 438 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 HSF4Q9ULV5 492 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 KCNK7Q9Y2U2 307 aa11.96□□□□□ -0.49
COL1A1-203ENST00000471344 RAB29O14966 203 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 SOX15O60248 233 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 CD3GP09693 182 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 PSMB9P28065 219 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 CEACAM6P40199 344 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 GNB1P62873 340 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 FHL3Q13643 280 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 ECSCRQ19T08 205 aa11.95□□□□□ -0.5
COL1A1-203ENST00000471344 KCTD21Q4G0X4 260 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms