RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 HRNRQ86YZ3 2850 aaPredicted RBP15.65■□□□□ 0.1
SMC4-209ENST00000468653 PIGBOS1A0A0B4J2F0 54 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 SSTR2P30874 369 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 RAB7AP51149 207 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 Q3ZCU0 254 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 ZNF546Q86UE3 836 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 OR52M1Q8NGK5 317 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 LEAP2Q969E1 77 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 C5orf30Q96GV9 206 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 SDHAF2Q9NX18 166 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 MIOXQ9UGB7 285 aa15.64■□□□□ 0.1
SMC4-209ENST00000468653 DUXBA0A1W2PPF3 345 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 L7N2F9 121 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 TSC22D2O75157 780 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 F12P00748 615 aaPredicted RBP15.64■□□□□ 0.09
SMC4-209ENST00000468653 CCL3L1P16619 93 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 TMEM33P57088 247 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 TLE4Q04727 773 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 CATR1Q13166 79 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 BTNL3Q6UXE8 466 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 OR10A7Q8NGE5 316 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 OR8B3Q8NGG8 313 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 OR8B2Q96RD0 313 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 ABHD14AQ9BUJ0 271 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 RPUSD1Q9UJJ7 312 aaKnown RBP15.64■□□□□ 0.09
SMC4-209ENST00000468653 MYO18BQ8IUG5 2567 aa15.64■□□□□ 0.09
SMC4-209ENST00000468653 SPTAN1Q13813 2472 aaKnown RBP15.63■□□□□ 0.09
SMC4-209ENST00000468653 ITGB1BP1O14713 200 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 MMP23AO75900 390 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 CXCL2P19875 107 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 ZNF134P52741 427 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 EFNA4P52798 201 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 S100A10P60903 97 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 IFITM2Q01629 132 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 IL15RAQ13261 267 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 TMEM155Q4W5P6 130 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 MFFQ9GZY8 342 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 MBD2Q9UBB5 411 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 LRBAP50851 2863 aa15.63■□□□□ 0.09
SMC4-209ENST00000468653 USP9XQ93008 2570 aaPredicted RBP15.62■□□□□ 0.09
SMC4-209ENST00000468653 TRBV23-1A0A0A0MS06 115 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 NDUFS7O75251 213 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 CLDN1O95832 211 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 PET100P0DJ07 73 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 C4BPBP20851 252 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 VDAC1P21796 283 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 EIF4EBP1Q13541 118 aaPredicted RBP15.62■□□□□ 0.09
SMC4-209ENST00000468653 RAB32Q13637 225 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 TMEM65Q6PI78 240 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 ZNF66Q6ZN08 573 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 TCTEX1D2Q8WW35 142 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 NEIL1Q96FI4 390 aaPredicted RBP15.62■□□□□ 0.09
SMC4-209ENST00000468653 HSD17B10Q99714 261 aaKnown RBP15.62■□□□□ 0.09
SMC4-209ENST00000468653 SLC31A2O15432 143 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 SRSF1Q07955 248 aaKnown RBP eCLIP15.62■□□□□ 0.099e-8■■□□□ 13.7
SMC4-209ENST00000468653 CT45A1Q5HYN5 189 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 UTF1Q5T230 341 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 HEPN1Q6WQI6 88 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 ZNF841Q6ZN19 808 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 CT45A3Q8NHU0 189 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 SPIN2AQ99865 258 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 SPIN2BQ9BPZ2 258 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 GON7Q9BXV9 100 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 IFI27L2Q9H2X8 130 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 SLA2Q9H6Q3 261 aa15.62■□□□□ 0.09
SMC4-209ENST00000468653 FLNCQ14315 2725 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 A0A1W2PPE3 182 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 GPR37O15354 613 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 SCGB1D2O95969 90 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 RPA2P15927 270 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 GNG10P50151 68 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 RPL30P62888 115 aaKnown RBP15.61■□□□□ 0.09
SMC4-209ENST00000468653 ZNF585BQ52M93 769 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 FAM219AQ8IW50 185 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 FOXRED2Q8IWF2 684 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 RNASE11Q8TAA1 199 aaKnown RBP15.61■□□□□ 0.09
SMC4-209ENST00000468653 RAB39BQ96DA2 213 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 USF3Q68DE3 2245 aa15.61■□□□□ 0.09
SMC4-209ENST00000468653 YLPM1P49750 1951 aaKnown RBP15.6■□□□□ 0.09
SMC4-209ENST00000468653 GPR6P46095 362 aaPredicted RBP15.6■□□□□ 0.09
SMC4-209ENST00000468653 AP2S1P53680 142 aaPredicted RBP15.6■□□□□ 0.09
SMC4-209ENST00000468653 ERVFRD-1P60508 538 aa15.6■□□□□ 0.09
SMC4-209ENST00000468653 OR2B11Q5JQS5 317 aa15.6■□□□□ 0.09
SMC4-209ENST00000468653 THOC7Q6I9Y2 204 aaKnown RBP15.6■□□□□ 0.09
SMC4-209ENST00000468653 DCUN1D4Q92564 292 aa15.6■□□□□ 0.09
SMC4-209ENST00000468653 RNF126Q9BV68 326 aa15.6■□□□□ 0.09
SMC4-209ENST00000468653 TNFSF18Q9UNG2 199 aa15.6■□□□□ 0.09
SMC4-209ENST00000468653 M0R1X1 148 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 OVOL3O00110 214 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 RLN2P04090 185 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 LPAR6P43657 344 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 SMCO1Q147U7 214 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 RPL39P5Q59GN2 51 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 NMSQ5H8A3 153 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 PRSS54Q6PEW0 395 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 TMUB2Q71RG4 321 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 TCTEX1D1Q8N7M0 179 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 INO80EQ8NBZ0 244 aaPredicted RBP15.59■□□□□ 0.09
SMC4-209ENST00000468653 ZNF439Q8NDP4 499 aa15.59■□□□□ 0.09
SMC4-209ENST00000468653 LSM5Q9Y4Y9 91 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms