RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 THNSL2Q86YJ6 484 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 TGIF2LXQ8IUE1 241 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 H1FOOQ8IZA3 346 aaPredicted RBP8.84□□□□□ -0.99
MSH5-212ENST00000467319 LYG1Q8N1E2 194 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 Q8N2B8 174 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 OR4F5Q8NH21 305 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 SNAPC3Q92966 411 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 SLIRPQ9GZT3 109 aaKnown RBP8.84□□□□□ -0.99
MSH5-212ENST00000467319 C11orf54Q9H0W9 315 aaPredicted RBP8.84□□□□□ -0.99
MSH5-212ENST00000467319 MIXL1Q9H2W2 232 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 RDH8Q9NYR8 311 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
MSH5-212ENST00000467319 BET1O15155 118 aa8.83□□□□□ -1
MSH5-212ENST00000467319 HSPA12AO43301 675 aa8.83□□□□□ -1
MSH5-212ENST00000467319 HLA-DQB1P01920 261 aa8.83□□□□□ -1
MSH5-212ENST00000467319 AMY1AP04745 511 aa8.83□□□□□ -1
MSH5-212ENST00000467319 AMY2AP04746 511 aa8.83□□□□□ -1
MSH5-212ENST00000467319 CRYBA1P05813 215 aa8.83□□□□□ -1
MSH5-212ENST00000467319 SNRNP70P08621 437 aaKnown RBP8.83□□□□□ -1
MSH5-212ENST00000467319 SOX6P35712 828 aa8.83□□□□□ -1
MSH5-212ENST00000467319 OR3A3P47888 321 aa8.83□□□□□ -1
MSH5-212ENST00000467319 LSAMPQ13449 338 aa8.83□□□□□ -1
MSH5-212ENST00000467319 HOGA1Q86XE5 327 aa8.83□□□□□ -1
MSH5-212ENST00000467319 LAX1Q8IWV1 398 aa8.83□□□□□ -1
MSH5-212ENST00000467319 GVQW1Q8N7I0 195 aa8.83□□□□□ -1
MSH5-212ENST00000467319 OR4C13Q8NGP0 309 aa8.83□□□□□ -1
MSH5-212ENST00000467319 OR10J5Q8NHC4 309 aa8.83□□□□□ -1
MSH5-212ENST00000467319 RBM14Q96PK6 669 aaKnown RBP8.83□□□□□ -1
MSH5-212ENST00000467319 MRPL20Q9BYC9 149 aaKnown RBP8.83□□□□□ -1
MSH5-212ENST00000467319 NPFFR1Q9GZQ6 430 aa8.83□□□□□ -1
MSH5-212ENST00000467319 GHITMQ9H3K2 345 aa8.83□□□□□ -1
MSH5-212ENST00000467319 ZNF702PQ9H963 129 aa8.83□□□□□ -1
MSH5-212ENST00000467319 PIPOXQ9P0Z9 390 aa8.83□□□□□ -1
MSH5-212ENST00000467319 ANXA10Q9UJ72 324 aa8.83□□□□□ -1
MSH5-212ENST00000467319 A0A1B0GUS0 222 aa8.82□□□□□ -1
MSH5-212ENST00000467319 RAB29O14966 203 aa8.82□□□□□ -1
MSH5-212ENST00000467319 PROP1O75360 226 aa8.82□□□□□ -1
MSH5-212ENST00000467319 TUSC2O75896 110 aa8.82□□□□□ -1
MSH5-212ENST00000467319 TPPPO94811 219 aa8.82□□□□□ -1
MSH5-212ENST00000467319 IGKV1D-33P01593 117 aa8.82□□□□□ -1
MSH5-212ENST00000467319 IGKV1-33P01594 117 aa8.82□□□□□ -1
MSH5-212ENST00000467319 LPLP06858 475 aa8.82□□□□□ -1
MSH5-212ENST00000467319 FAM106CPP0CH98 169 aa8.82□□□□□ -1
MSH5-212ENST00000467319 NAT1P18440 290 aa8.82□□□□□ -1
MSH5-212ENST00000467319 CD1BP29016 333 aa8.82□□□□□ -1
MSH5-212ENST00000467319 CEACAM6P40199 344 aa8.82□□□□□ -1
MSH5-212ENST00000467319 CBX5P45973 191 aa8.82□□□□□ -1
MSH5-212ENST00000467319 PROK1P58294 105 aa8.82□□□□□ -1
MSH5-212ENST00000467319 CNIH2Q6PI25 160 aa8.82□□□□□ -1
MSH5-212ENST00000467319 DTX3Q8N9I9 347 aa8.82□□□□□ -1
MSH5-212ENST00000467319 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.82□□□□□ -1
MSH5-212ENST00000467319 BEST4Q8NFU0 473 aa8.82□□□□□ -1
MSH5-212ENST00000467319 LINC01006Q8NI28 216 aa8.82□□□□□ -1
MSH5-212ENST00000467319 GPX8Q8TED1 209 aa8.82□□□□□ -1
MSH5-212ENST00000467319 CAPSLQ8WWF8 208 aa8.82□□□□□ -1
MSH5-212ENST00000467319 WFDC12Q8WWY7 111 aa8.82□□□□□ -1
MSH5-212ENST00000467319 C5orf30Q96GV9 206 aa8.82□□□□□ -1
MSH5-212ENST00000467319 ABHD14BQ96IU4 210 aa8.82□□□□□ -1
MSH5-212ENST00000467319 NABP2Q9BQ15 211 aa8.82□□□□□ -1
MSH5-212ENST00000467319 SLC25A33Q9BSK2 321 aa8.82□□□□□ -1
MSH5-212ENST00000467319 ST6GALNAC5Q9BVH7 336 aa8.82□□□□□ -1
MSH5-212ENST00000467319 NXF2Q9GZY0 626 aaKnown RBP8.82□□□□□ -1
MSH5-212ENST00000467319 IGHV3-72A0A0B4J1Y9 119 aa8.81□□□□□ -1
MSH5-212ENST00000467319 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
MSH5-212ENST00000467319 ZNF736B4DX44 427 aaPredicted RBP8.81□□□□□ -1
MSH5-212ENST00000467319 CTXN2P0C2S0 81 aa8.81□□□□□ -1
MSH5-212ENST00000467319 RPL39P5Q59GN2 51 aa8.81□□□□□ -1
MSH5-212ENST00000467319 MOB3BQ86TA1 216 aa8.81□□□□□ -1
MSH5-212ENST00000467319 EAF1Q96JC9 268 aaPredicted RBP8.81□□□□□ -1
MSH5-212ENST00000467319 AKR1E2Q96JD6 320 aa8.81□□□□□ -1
MSH5-212ENST00000467319 GINS4Q9BRT9 223 aa8.81□□□□□ -1
MSH5-212ENST00000467319 OR2D2Q9H210 308 aa8.81□□□□□ -1
MSH5-212ENST00000467319 SCPEP1Q9HB40 452 aa8.81□□□□□ -1
MSH5-212ENST00000467319 BEX1Q9HBH7 125 aa8.81□□□□□ -1
MSH5-212ENST00000467319 RSL24D1Q9UHA3 163 aaKnown RBP8.81□□□□□ -1
MSH5-212ENST00000467319 MOB4Q9Y3A3 225 aa8.81□□□□□ -1
MSH5-212ENST00000467319 CMYA5Q8N3K9 4069 aa8.8□□□□□ -1
MSH5-212ENST00000467319 SMIM31A0A1B0GVY4 71 aa8.8□□□□□ -1
MSH5-212ENST00000467319 MEIS3P1A6NDR6 274 aa8.8□□□□□ -1
MSH5-212ENST00000467319 OR5H14A6NHG9 310 aa8.8□□□□□ -1
MSH5-212ENST00000467319 M0QZK8 103 aa8.8□□□□□ -1
MSH5-212ENST00000467319 CTDSP2O14595 271 aa8.8□□□□□ -1
MSH5-212ENST00000467319 CT45A6P0DMU7 189 aa8.8□□□□□ -1
MSH5-212ENST00000467319 CT45A5P0DMU8 189 aa8.8□□□□□ -1
MSH5-212ENST00000467319 CT45A7P0DMV0 189 aa8.8□□□□□ -1
MSH5-212ENST00000467319 TMEM11P17152 192 aa8.8□□□□□ -1
MSH5-212ENST00000467319 PRSS3P35030 304 aa8.8□□□□□ -1
MSH5-212ENST00000467319 C12orf54Q6X4T0 127 aa8.8□□□□□ -1
MSH5-212ENST00000467319 C5orf56Q8N8D9 126 aa8.8□□□□□ -1
MSH5-212ENST00000467319 OR5AN1Q8NGI8 311 aa8.8□□□□□ -1
MSH5-212ENST00000467319 OR2T10Q8NGZ9 312 aa8.8□□□□□ -1
MSH5-212ENST00000467319 S1PR3Q99500 378 aa8.8□□□□□ -1
MSH5-212ENST00000467319 ZNF747Q9BV97 191 aa8.8□□□□□ -1
MSH5-212ENST00000467319 SERTAD4Q9NUC0 356 aa8.8□□□□□ -1
MSH5-212ENST00000467319 EXTL2Q9UBQ6 330 aa8.8□□□□□ -1
MSH5-212ENST00000467319 GAB2Q9UQC2 676 aa8.8□□□□□ -1
MSH5-212ENST00000467319 OR2W1Q9Y3N9 320 aa8.8□□□□□ -1
MSH5-212ENST00000467319 TRRAPQ9Y4A5 3859 aa8.8□□□□□ -1
MSH5-212ENST00000467319 IGKV1D-13A0A0B4J2D9 117 aa8.79□□□□□ -1
MSH5-212ENST00000467319 H0YJW9 148 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms