RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PPP1CCP36873 323 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 EDDM3BP56851 147 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 UBA52P62987 128 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 MRPS11P82912 194 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 EXOSC2Q13868 293 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 GNMTQ14749 295 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 C17orf58Q2M2W7 97 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 MORN2Q502X0 79 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 CLLU1Q5K131 121 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 MEX3BQ6ZN04 569 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 TGIF2LYQ8IUE0 185 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 ZCCHC24Q8N2G6 241 aaKnown RBP7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 OR1S1Q8NH92 325 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 AGMATQ9BSE5 352 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 DCTN5Q9BTE1 182 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 PLEKHA2Q9HB19 425 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 GFOD1Q9NXC2 390 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 OR5AC2Q9NZP5 309 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 LPAR3Q9UBY5 353 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 KCNS2Q9ULS6 477 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 NSG2Q9Y328 171 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 POMT1Q9Y6A1 747 aa7.9□□□□□ -1.14
APOBEC1-202ENST00000467171 A0A1B0GU03 582 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 K7EPK0 472 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 TAAR5O14804 337 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ST8SIA3O43173 380 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 TNFSF12O43508 249 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 PITX3O75364 302 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ATG12O94817 140 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 SELLP14151 372 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 MMP9P14780 707 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 HTR2BP41595 481 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 RAB7AP51149 207 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 S100A10P60903 97 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ID3Q02535 119 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 CATR1Q13166 79 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 Q3ZCU0 254 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF585BQ52M93 769 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 GPR157Q5UAW9 335 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 THOC7Q6I9Y2 204 aaKnown RBP7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 SHISA2Q6UWI4 295 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 TCF23Q7RTU1 214 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM71E2Q8N5Q1 922 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 FAM216BQ8N7L0 139 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 OR51H1Q8NH63 302 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 RFESDQ8TAC1 157 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 STOML3Q8TAV4 291 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 SCARB1Q8WTV0 552 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 CCL17Q92583 94 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 RRNAD1Q96FB5 475 aaKnown RBP7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 PHYHIPLQ96FC7 376 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 HSD17B10Q99714 261 aaKnown RBP7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ARPC5LQ9BPX5 153 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 OR2D2Q9H210 308 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 C11orf1Q9H5F2 150 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 CBLN4Q9NTU7 201 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 GNG12Q9UBI6 72 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 LINC00312Q9Y6C7 94 aa7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 DSPP15924 2871 aaKnown RBP7.89□□□□□ -1.15
APOBEC1-202ENST00000467171 ESPL1Q14674 2120 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 A0A1B0GW55 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 TMPRSS2O15393 492 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 ADAM20O43506 726 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L2P0CJ85 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L3P0CJ86 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L4P0CJ87 422 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L5P0CJ88 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L6P0CJ89 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L7P0CJ90 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 HKR1P10072 659 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 NKX2-1P43699 371 aaPredicted RBP7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 P2RY1P47900 373 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 UQCRFS1P47985 274 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 AP2S1P53680 142 aaPredicted RBP7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 HFEQ30201 348 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 LRRC10Q5BKY1 277 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 C11orf71Q6IPW1 123 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4L9Q6RFH8 374 aaPredicted RBP7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DTX2Q86UW9 622 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 CD300LFQ8TDQ1 290 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 NEU4Q8WWR8 484 aaPredicted RBP7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 ST8SIA2Q92186 375 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 GPHA2Q96T91 129 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 SDHAF2Q9NX18 166 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 IDI2-AS1Q9NZ38 188 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 DUX4Q9UBX2 424 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 SLC25A10Q9UBX3 287 aaPredicted RBP7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 ACACBO00763 2458 aa7.88□□□□□ -1.15
APOBEC1-202ENST00000467171 ZZEF1O43149 2961 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 IGHV3-43A0A0B4J1X8 118 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RPS10-NUDT3A0A1W2PQS6 291 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 LINC00862A6NCI5 91 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 MSGN1A6NI15 193 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 F5H0A9 414 aaPredicted RBP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 NDUFB3O43676 98 aa7.87□□□□□ -1.15
APOBEC1-202ENST00000467171 ZG16O60844 167 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms