RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 G3V318 75 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 ZBTB25P24278 435 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 CNTFRP26992 372 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 PSMB8P28062 276 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 RAB11BQ15907 218 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 LY6G6FQ5SQ64 297 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 FAM71F2Q6NXP2 309 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 LYPD6Q86Y78 171 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 RNF152Q8N8N0 203 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 OR1N2Q8NGR9 330 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 UBE2E2Q96LR5 201 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 TM2D1Q9BX74 207 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 RNF150Q9ULK6 438 aa13.7□□□□□ -0.22
COL7A1-206ENST00000466591 A0A1W2PN81 502 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 SLC22A1O15245 554 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 RGS10O43665 173 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 PSMA1P25786 263 aaKnown RBP13.69□□□□□ -0.22
COL7A1-206ENST00000466591 MC5RP33032 325 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 CHRNA7P36544 502 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 CEACAM6P40199 344 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 CFHR3Q02985 330 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF616Q08AN1 781 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 TMEM267Q0VDI3 215 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-206ENST00000466591 UNC119Q13432 240 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 ODF3L1Q8IXM7 274 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 ABHD14BQ96IU4 210 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 PRR25Q96S07 402 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 IFI27L2Q9H2X8 130 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 VCX3BQ9H321 246 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 GHITMQ9H3K2 345 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 C12orf4Q9NQ89 552 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 AK3Q9UIJ7 227 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF580Q9UK33 172 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 WASHC3Q9Y3C0 194 aa13.69□□□□□ -0.22
COL7A1-206ENST00000466591 AK6Q9Y3D8 172 aaKnown RBP13.69□□□□□ -0.22
COL7A1-206ENST00000466591 UCHL1P09936 223 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 CPEP16870 476 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 HLA-DRB3P79483 266 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 RPL39P5Q59GN2 51 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 GLDNQ6ZMI3 551 aaPredicted RBP13.68□□□□□ -0.22
COL7A1-206ENST00000466591 CYYR1Q96J86 154 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 RITA1Q96K30 269 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 FBXL15Q9H469 300 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 GNB4Q9HAV0 340 aa13.68□□□□□ -0.22
COL7A1-206ENST00000466591 IGHV7-81A0A0B4J1V7 117 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 TMEM14DPA8MWL7 114 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 RRHO14718 337 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 SOCS1O15524 211 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 NAPSAO96009 420 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 APOA2P02652 100 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
COL7A1-206ENST00000466591 VEGFCP49767 419 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 RAB9AP51151 201 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 AQP4P55087 323 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 NPBQ8NG41 125 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 CMSS1Q9BQ75 279 aaKnown RBP13.67□□□□□ -0.22
COL7A1-206ENST00000466591 KLK15Q9H2R5 256 aa13.67□□□□□ -0.22
COL7A1-206ENST00000466591 FOXA2Q9Y261 457 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF256Q9Y2P7 627 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-206ENST00000466591 ERICH4A6NGS2 130 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 SLC17A2O00624 439 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 RBBP9O75884 186 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 INSL3P51460 131 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 PSMD7P51665 324 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 RPS25P62851 125 aaKnown RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 CBX3Q13185 183 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF660Q6AZW8 331 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 TCTEX1D1Q8N7M0 179 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF491Q8N8L2 437 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 OR56B1Q8NGI3 324 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 WWC2-AS2Q96NR7 200 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 TSNAXQ99598 290 aaKnown RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 HDHD3Q9BSH5 251 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 LPAR5Q9H1C0 372 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 OR1A1Q9P1Q5 309 aa13.66□□□□□ -0.22
COL7A1-206ENST00000466591 METTL1Q9UBP6 276 aaKnown RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 LSM2Q9Y333 95 aaKnown RBP13.66□□□□□ -0.22
COL7A1-206ENST00000466591 OVOL1O14753 267 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 SAP30O75446 220 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 NDUFA3O95167 84 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 CD3GP09693 182 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 NHLRC4P0CG21 123 aaPredicted RBP13.65□□□□□ -0.22
COL7A1-206ENST00000466591 RPS16P62249 146 aaKnown RBP13.65□□□□□ -0.22
COL7A1-206ENST00000466591 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 PYHIN1Q6K0P9 492 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 UNQ5815/PRO19632Q6UWF5 114 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 PPP1R27Q86WC6 154 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 ARHGAP5-AS1Q96IT6 56 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 ZNF355PQ9NSJ1 428 aa13.65□□□□□ -0.22
COL7A1-206ENST00000466591 RBM7Q9Y580 266 aaKnown RBP13.65□□□□□ -0.22
COL7A1-206ENST00000466591 A0A0A6YYD4 124 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 H0YJW9 148 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 PDCD5O14737 125 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 DENRO43583 198 aaKnown RBP13.64□□□□□ -0.23
COL7A1-206ENST00000466591 CT45A6P0DMU7 189 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 CT45A5P0DMU8 189 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 CT45A7P0DMV0 189 aa13.64□□□□□ -0.23
COL7A1-206ENST00000466591 PPIFP30405 207 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms