RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 CLEC12BQ2HXU8 276 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 TBC1D28Q2M2D7 210 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 RIBC1Q8N443 379 aaPredicted RBP1.35□□□□□ -2.19
SMC4-205ENST00000465563 PPCDCQ96CD2 204 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 SMIM12Q96EX1 92 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 TRNT1Q96Q11 434 aaKnown RBP1.35□□□□□ -2.19
SMC4-205ENST00000465563 CXCL16Q9H2A7 254 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 OR51B6Q9H340 312 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 CHMP4BQ9H444 224 aaKnown RBP1.35□□□□□ -2.19
SMC4-205ENST00000465563 CFAP45Q9UL16 551 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 FIS1Q9Y3D6 152 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 RTTNQ86VV8 2226 aa1.35□□□□□ -2.19
SMC4-205ENST00000465563 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
SMC4-205ENST00000465563 MALRD1Q5VYJ5 2156 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 TRGV4A0A0C4DH28 118 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 MUC21A0A0G2JKD1 596 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 MUC21A0A140T8X8 626 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 FABP12A6NFH5 140 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 KNCNA6PVL3 124 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 CALUO43852 315 aaPredicted RBP1.34□□□□□ -2.19
SMC4-205ENST00000465563 LY6HO94772 140 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 SOD1P00441 154 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 OR13C7P0DN81 318 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 NQO1P15559 274 aaKnown RBP1.34□□□□□ -2.19
SMC4-205ENST00000465563 CRATP43155 626 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 CLDN12P56749 244 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 OR11H1Q8NG94 326 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 RBP7Q96R05 134 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 MED18Q9BUE0 208 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 ZNF426Q9BUY5 554 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 ZNF471Q9BX82 626 aaPredicted RBP1.34□□□□□ -2.19
SMC4-205ENST00000465563 CDCA4Q9BXL8 241 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 MED28Q9H204 178 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 SNX10Q9Y5X0 201 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 PUS1Q9Y606 427 aaKnown RBP eCLIP1.34□□□□□ -2.19
SMC4-205ENST00000465563 MINOS1-NBL1R4GNA1 71 aa1.34□□□□□ -2.19
SMC4-205ENST00000465563 KMT2BQ9UMN6 2715 aaPredicted RBP1.34□□□□□ -2.2
SMC4-205ENST00000465563 CR1P17927 2039 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 THSD7AQ9UPZ6 1657 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 A0A0J9YX75 114 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 DHRS12A0PJE2 317 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 LY6LH3BQJ8 138 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 OVOL1O14753 267 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 CRTAPO75718 401 aaPredicted RBP1.33□□□□□ -2.2
SMC4-205ENST00000465563 ARL6IP5O75915 188 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 S1PR2O95136 353 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 CCL3P10147 92 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 CPMP14384 443 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 GRPRP30550 384 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 CASQ1P31415 396 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 RPL14P50914 215 aaKnown RBP1.33□□□□□ -2.2
SMC4-205ENST00000465563 H2BFSP57053 126 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 ACTBP60709 375 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 DAD1P61803 113 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 ACTG1P63261 375 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 SLC35A2P78381 396 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 HES1Q14469 280 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 TMEM176BQ3YBM2 270 aaPredicted RBP1.33□□□□□ -2.2
SMC4-205ENST00000465563 LCN8Q6JVE9 175 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 SCGB1D4Q6XE38 83 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 ATP6V1C2Q8NEY4 427 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 ERMNQ8TAM6 284 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.33□□□□□ -2.2
SMC4-205ENST00000465563 ABHD14BQ96IU4 210 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 ZNF514Q96K75 400 aaPredicted RBP1.33□□□□□ -2.2
SMC4-205ENST00000465563 OR7D2Q96RA2 312 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 LRRC19Q9H756 370 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 IMP3Q9NV31 184 aaKnown RBP1.33□□□□□ -2.2
SMC4-205ENST00000465563 GLS2Q9UI32 602 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 PIK3R4Q99570 1358 aa1.33□□□□□ -2.2
SMC4-205ENST00000465563 IGHV3-73A0A0B4J1V6 119 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 DAPL1A0PJW8 107 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 LINC00862A6NCI5 91 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 METTL15A6NJ78 407 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 CCRL2O00421 344 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 ATP5G1P05496 136 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 CD7P09564 240 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 P0DMU3 169 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 FAM231AP0DMU4 169 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 FAM231CP0DMU5 169 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 ESDP10768 282 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 CRYBB3P26998 211 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 MIPP30301 263 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 PPP1CCP36873 323 aaKnown RBP1.32□□□□□ -2.2
SMC4-205ENST00000465563 LPAR6P43657 344 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 RWDD2BP57060 319 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 UBE2G2P60604 165 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 MGAT3Q09327 533 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 TMEM267Q0VDI3 215 aaPredicted RBP1.32□□□□□ -2.2
SMC4-205ENST00000465563 HLA-DRB5Q30154 266 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 ACSBG2Q5FVE4 666 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 LGALS9CQ6DKI2 356 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 RASL11AQ6T310 242 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 DRAM2Q6UX65 266 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 OR4K13Q8NH42 304 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 DNAJB3Q8WWF6 145 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 DNAJC30Q96LL9 226 aa1.32□□□□□ -2.2
SMC4-205ENST00000465563 METTL9Q9H1A3 318 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms