RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM157AC9JC47 383 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 B3GALNT1O75752 331 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 IL15RAQ13261 267 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 IGSF11Q5DX21 431 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 CLLU1Q5K131 121 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 SLC51BQ86UW2 128 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 RTN4IP1Q8WWV3 396 aaPredicted RBP13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 H1FXQ92522 213 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 SLC2A9Q9NRM0 540 aa13.96□□□□□ -0.17
EXOSC3-203ENST00000465229 ABCA2Q9BZC7 2435 aa13.96□□□□□ -0.18
EXOSC3-203ENST00000465229 WNK2Q9Y3S1 2297 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 TMEM30CPA0ZSE6 113 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 ODAMA1E959 279 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 LINC00862A6NCI5 91 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 CFDP00746 253 aaPredicted RBP13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 HEXAP06865 529 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 LYL1P12980 280 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 RND3P61587 244 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 RPL31P62899 125 aaKnown RBP13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 MAPK1IP1LQ8NDC0 245 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 DCTN5Q9BTE1 182 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 CABLES2Q9BTV7 478 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 C19orf12Q9NSK7 152 aa13.95□□□□□ -0.18
EXOSC3-203ENST00000465229 TRAV39A0A0B4J263 110 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 MEX3AA1L020 520 aaKnown RBP13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 CYSRT1A8MQ03 144 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 A8MXK9 166 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 C22orf46C9J442 243 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 ADAP1O75689 374 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 SCTP09683 121 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 FXYD4P59646 89 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 HLA-DRB3P79483 266 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 TMEM187Q14656 261 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 OR8H3Q8N146 312 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 NCOR1P1Q9H4R4 102 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 RDH8Q9NYR8 311 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 CELSR1Q9NYQ6 3014 aa13.94□□□□□ -0.18
EXOSC3-203ENST00000465229 LOC105371242A0A075B767 164 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RNF222A6NCQ9 220 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 IFNA21P01568 189 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 PET100P0DJ07 73 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LCN2P80188 198 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 MEF2CQ06413 473 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LRRC37A5PQ49AS3 106 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 TMEM200BQ69YZ2 307 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 CIARTQ8N365 385 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 INO80EQ8NBZ0 244 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 C1orf159Q96HA4 380 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 MBD2Q9UBB5 411 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RPUSD1Q9UJJ7 312 aaKnown RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 TRBV23-1A0A0A0MS06 115 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RPS10-NUDT3A0A1W2PQS6 291 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 FOXH1O75593 365 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RCC1P18754 421 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RAB14P61106 215 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 SRPXP78539 464 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 PAX2Q02962 417 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 TCF23Q7RTU1 214 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LY6G5BQ8NDX9 201 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 OR13A1Q8NGR1 328 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 C8orf46Q8TAG6 207 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 OR10C1Q96KK4 312 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 RNF126Q9BV68 326 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 LPAR2Q9HBW0 351 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 TRAPPC2LQ9UL33 140 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 POLR3KQ9Y2Y1 108 aaPredicted RBP13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 ABCA1O95477 2261 aa13.93□□□□□ -0.18
EXOSC3-203ENST00000465229 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.92□□□□□ -0.184e-6■■■■□ 23.7
EXOSC3-203ENST00000465229 IGKV1-6A0A0C4DH72 117 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 hADV38S2A0JD32 116 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 BCL2L11O43521 198 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 HOXB5P09067 269 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 GNRHRP30968 328 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 UBA52P62987 128 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 ZNF565Q8N9K5 539 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 SCARB1Q8WTV0 552 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 CORO2AQ92828 525 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 MBNL3Q9NUK0 354 aaKnown RBP13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 PRR13Q9NZ81 148 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 OR6C3Q9NZP0 311 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 AUP1Q9Y679 476 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 TLN2Q9Y4G6 2542 aa13.92□□□□□ -0.18
EXOSC3-203ENST00000465229 KANTRA0A1W2PQU2 76 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 GPR31O00270 319 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 BET1O15155 118 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 MPPED1O15442 326 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 OR5AC1P0C628 307 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 CGB3P0DN86 165 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 CGB7P0DN87 165 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 ZNF273Q14593 569 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 CR1LQ2VPA4 569 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 PHLDA2Q53GA4 152 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 LGI3Q8N145 548 aa13.91□□□□□ -0.18
EXOSC3-203ENST00000465229 MRGPRDQ8TDS7 321 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms