RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 YPEL1O60688 119 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 EGR2P11161 476 aaPredicted RBP11.18□□□□□ -0.62
MCF2L-220ENST00000464800 ZP3P21754 424 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 HTD2P86397 168 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 Q499Y3 187 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 AKIRIN2Q53H80 203 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 FAM71F2Q6NXP2 309 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 GLIPR1L1Q6UWM5 242 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 GTSCR1Q86UQ5 136 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 ZNF555Q8NEP9 628 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 MUL1Q969V5 352 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 RHOVQ96L33 236 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 YPEL2Q96QA6 119 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 FAM103A1Q9BTL3 118 aaKnown RBP11.18□□□□□ -0.62
MCF2L-220ENST00000464800 TUBA4BQ9H853 241 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 S100A14Q9HCY8 104 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 CLEC2DQ9UHP7 191 aa11.18□□□□□ -0.62
MCF2L-220ENST00000464800 OR5H14A6NHG9 310 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 H0Y980 276 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 FCN1O00602 326 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 TRGV3P03979 118 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 TFAP2AP05549 437 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 MYL12AP19105 171 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 FUT3P21217 361 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 RPS11P62280 158 aaKnown RBP eCLIP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 DMKNQ6E0U4 476 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 AWAT2Q6E213 333 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 PQLC1Q8N2U9 271 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 JAGN1Q8N5M9 183 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 MRPL30Q8TCC3 161 aaKnown RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 GALMQ96C23 342 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 TMED9Q9BVK6 235 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 SELENOIQ9C0D9 397 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 IFI27L2Q9H2X8 130 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 BANF2Q9H503 90 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 RANGRFQ9HD47 186 aaPredicted RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 CNOT2Q9NZN8 540 aaKnown RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 DIMT1Q9UNQ2 313 aaKnown RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
MCF2L-220ENST00000464800 EXOSC1Q9Y3B2 195 aaKnown RBP11.17□□□□□ -0.62
MCF2L-220ENST00000464800 A0A1W2PPK0 400 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 IRGMA1A4Y4 181 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 GLAP06280 429 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 MGMTP16455 207 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 OR9G4Q8NGQ1 327 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 RDH12Q96NR8 316 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 RETNQ9HD89 108 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
MCF2L-220ENST00000464800 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 STEAP1Q9UHE8 339 aa11.16□□□□□ -0.62
MCF2L-220ENST00000464800 TRBV5-7A0A0A0MS05 114 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 C13orf42A0A1B0GVH6 325 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 H7C2Y5 167 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 PDCD6O75340 191 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 CRTAPO75718 401 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-220ENST00000464800 RBBP9O75884 186 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 GSTP1P09211 210 aaKnown RBP11.15□□□□□ -0.62
MCF2L-220ENST00000464800 FSTP19883 344 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 SIGIRRQ6IA17 410 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 LCN12Q6JVE5 192 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 CDH26Q8IXH8 852 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 TMEM80Q96HE8 168 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 CYYR1Q96J86 154 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 Q96M66 194 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 OR14A2Q96R54 314 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 ZNF355PQ9NSJ1 428 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 ABRACLQ9P1F3 81 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 METTL1Q9UBP6 276 aaKnown RBP11.15□□□□□ -0.62
MCF2L-220ENST00000464800 WASHC3Q9Y3C0 194 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 LRRC42Q9Y546 428 aa11.15□□□□□ -0.62
MCF2L-220ENST00000464800 H0YJW9 148 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 RAB29O14966 203 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 CA2P00918 260 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 CT45A6P0DMU7 189 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 CT45A5P0DMU8 189 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 CT45A7P0DMV0 189 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 MC5RP33032 325 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 MED21Q13503 144 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-220ENST00000464800 HMGN3Q15651 99 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 MOGAT2Q3SYC2 334 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 GLDNQ6ZMI3 551 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-220ENST00000464800 ZNF485Q8NCK3 441 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 IL1F10Q8WWZ1 152 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 FAM110AQ9BQ89 295 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 THAP7Q9BT49 309 aaPredicted RBP11.14□□□□□ -0.63
MCF2L-220ENST00000464800 SLC23A1Q9UHI7 598 aa11.14□□□□□ -0.63
MCF2L-220ENST00000464800 A0A0G2JLM5 398 aa11.13□□□□□ -0.63
MCF2L-220ENST00000464800 PNMA8CA0A1B0GUJ8 204 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms