RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.41□□□□□ -0.74
R3HDM1-213ENST00000463230 SCTP09683 121 aa10.4□□□□□ -0.74
R3HDM1-213ENST00000463230 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.74
R3HDM1-213ENST00000463230 FUNDC2Q9BWH2 189 aa10.4□□□□□ -0.74
R3HDM1-213ENST00000463230 GAB2Q9UQC2 676 aa10.4□□□□□ -0.74
R3HDM1-213ENST00000463230 SAA2-SAA4A0A096LPE2 208 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 CTXN2P0C2S0 81 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 SAA2P0DJI9 122 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 VSIG10L2P0DP72 767 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 CEACAM6P40199 344 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 ABCA11PQ4W5N1 156 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 NABP2Q9BQ15 211 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 AGMATQ9BSE5 352 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 DIABLOQ9NR28 239 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 TRBV6-7A0A0A0MS04 114 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 FBXO24O75426 580 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF260Q3ZCT1 412 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 FBLN7Q53RD9 439 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 SLC25A38Q96DW6 304 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 C11orf54Q9H0W9 315 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 ABCG5Q9H222 651 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 OR1A1Q9P1Q5 309 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 FBN3Q75N90 2809 aa10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 TET2Q6N021 2002 aaPredicted RBP10.39□□□□□ -0.75
R3HDM1-213ENST00000463230 A0A075B6Q4 140 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 IGKV1-6A0A0C4DH72 117 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 OR5H14A6NHG9 310 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 MC5RP33032 325 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 GNG2P59768 71 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 SRSF4Q08170 494 aaKnown RBP10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 C5orf24Q7Z6I8 188 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 ANKRD13BQ86YJ7 626 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 OR10J5Q8NHC4 309 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 SLC25A46Q96AG3 418 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 CMTM3Q96MX0 182 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF251Q9BRH9 671 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 MRPL20Q9BYC9 149 aaKnown RBP10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF221Q9UK13 617 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 KCNAB3O43448 404 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 RBBP9O75884 186 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 RPS19P39019 145 aaKnown RBP10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 UBE2NLQ5JXB2 153 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 OR5H6Q8NGV6 325 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 RNF5Q99942 180 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 MMP27Q9H306 513 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 RDH8Q9NYR8 311 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF580Q9UK33 172 aa10.38□□□□□ -0.75
R3HDM1-213ENST00000463230 IGHV3-72A0A0B4J1Y9 119 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 IGHG2P01859 326 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 HNF4GQ14541 408 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 Q6ZS46 218 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 Q8N9W7 124 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 ACOT12Q8WYK0 555 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 PLSCR3Q9NRY6 295 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 GABARAPO95166 117 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 GSTT2P0CG29 244 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 GSTT2BP0CG30 244 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 CBX5P45973 191 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 OR3A3P47888 321 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 ALDH3B2P48448 385 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 FOXRED2Q8IWF2 684 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 CHPT1Q8WUD6 406 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 RASL11BQ9BPW5 248 aa10.37□□□□□ -0.75
R3HDM1-213ENST00000463230 TMEM235A6NFC5 223 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 OPN1MWP04001 364 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 CSF1P09603 554 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 OPN1MW2P0DN77 364 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 OPN1MW3P0DN78 364 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 GPR12P47775 334 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 LSM3P62310 102 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 H1FOOQ8IZA3 346 aaPredicted RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 FAM71E2Q8N5Q1 922 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 COMMD1Q8N668 190 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 OR5AN1Q8NGI8 311 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 S100A16Q96FQ6 103 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 GINS4Q9BRT9 223 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 GON7Q9BXV9 100 aa10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 PARP12Q9H0J9 701 aaKnown RBP10.36□□□□□ -0.75
R3HDM1-213ENST00000463230 XRCC3O43542 346 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 IGSF11Q5DX21 431 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 C9orf152Q5JTZ5 239 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 SLC35E3Q7Z769 313 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 NPBQ8NG41 125 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 OR5AU1Q8NGC0 362 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 AUNIPQ9H7T9 357 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF230Q9UIE0 474 aaPredicted RBP10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 WASHC3Q9Y3C0 194 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 TRAV18A0A075B6X5 111 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 ZNF736B4DX44 427 aaPredicted RBP10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 AP4M1O00189 453 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 BET1O15155 118 aa10.35□□□□□ -0.75
R3HDM1-213ENST00000463230 CT45A6P0DMU7 189 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms