RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 STUB1Q9UNE7 303 aa10.36□□□□□ -0.75
HDAC1-203ENST00000463172 TGP01266 2768 aa10.36□□□□□ -0.75
HDAC1-203ENST00000463172 OR5H14A6NHG9 310 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 ZNF736B4DX44 427 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 TRDCB7Z8K6 153 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 SCGNO76038 276 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 TALDO1P37837 337 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 ACTBP60709 375 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 RPL23AP62750 156 aaKnown RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 BEAN1Q3B7T3 259 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 CXorf66Q5JRM2 361 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 ZNF773Q6PK81 442 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 TPRA1Q86W33 373 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 FAM71E2Q8N5Q1 922 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 OR4A4PQ8NGN8 299 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 OR10R2Q8NGX6 335 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 DPF1Q92782 380 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 RCC1LQ96I51 464 aaKnown RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 NABP2Q9BQ15 211 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 IFI27L2Q9H2X8 130 aa10.35□□□□□ -0.75
HDAC1-203ENST00000463172 ZNF107Q9UII5 783 aaPredicted RBP10.35□□□□□ -0.75
HDAC1-203ENST00000463172 FOXI3A8MTJ6 420 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-203ENST00000463172 LDLRAD4O15165 306 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 NBR2O15453 112 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 RBBP9O75884 186 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 ELANEP08246 267 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 FGF9P31371 208 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-203ENST00000463172 OR3A3P47888 321 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 TMEM50BP56557 158 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 KPRPQ5T749 579 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-203ENST00000463172 ODF3L1Q8IXM7 274 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 WFDC9Q8NEX5 89 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
HDAC1-203ENST00000463172 PLSCR3Q9NRY6 295 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 LINC00527Q9UJ94 153 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 ZNF580Q9UK33 172 aa10.34□□□□□ -0.75
HDAC1-203ENST00000463172 NOTOA8MTQ0 251 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 H7C2Y5 167 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 DIRAS3O95661 229 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 GSTP1P09211 210 aaKnown RBP10.33□□□□□ -0.76
HDAC1-203ENST00000463172 F2RL1P55085 397 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 OR10A3P58181 314 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 CBX3Q13185 183 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 FOXE3Q13461 319 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 ARFRP1Q13795 201 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 PLGLAQ15195 96 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 C10orf99Q6UWK7 81 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 KLHL30-AS1Q8NEE0 82 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 OR10J5Q8NHC4 309 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 KCTD7Q96MP8 289 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 RNF5Q99942 180 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 MCRIP2Q9BUT9 160 aaKnown RBP10.33□□□□□ -0.76
HDAC1-203ENST00000463172 ATG5Q9H1Y0 275 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 VCX3AQ9NNX9 186 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 TXNL4BQ9NX01 149 aaKnown RBP10.33□□□□□ -0.76
HDAC1-203ENST00000463172 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
HDAC1-203ENST00000463172 WASHC3Q9Y3C0 194 aa10.33□□□□□ -0.76
HDAC1-203ENST00000463172 A0A075B6Q4 140 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 FABP7O15540 132 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 APOA2P02652 100 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 IGF1P05019 195 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 SCTP09683 121 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 SLC2A2P11168 524 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-203ENST00000463172 HIST1H1DP16402 221 aaKnown RBP10.32□□□□□ -0.76
HDAC1-203ENST00000463172 MYCNOSP40205 109 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 C5orf64Q2M2E5 130 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 OXLD1Q5BKU9 147 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 PLAC9Q5JTB6 97 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 LIN54Q6MZP7 749 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 TMEM65Q6PI78 240 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 FAM131AQ6UXB0 335 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 C5orf24Q7Z6I8 188 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-203ENST00000463172 NPBQ8NG41 125 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 GINS4Q9BRT9 223 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 C11orf54Q9H0W9 315 aaPredicted RBP10.32□□□□□ -0.76
HDAC1-203ENST00000463172 OR1A1Q9P1Q5 309 aa10.32□□□□□ -0.76
HDAC1-203ENST00000463172 RBM7Q9Y580 266 aaKnown RBP10.32□□□□□ -0.76
HDAC1-203ENST00000463172 FCGR3AP08637 254 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 GNB3P16520 340 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 PITPNAQ00169 270 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 SRSF7Q16629 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC1-203ENST00000463172 KCTD21Q4G0X4 260 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 RPL39P5Q59GN2 51 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 OR8U1Q8NH10 309 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 ABHD14BQ96IU4 210 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 CYYR1Q96J86 154 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 OR51J1Q9H342 316 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 RDH8Q9NYR8 311 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 RNF150Q9ULK6 438 aa10.31□□□□□ -0.76
HDAC1-203ENST00000463172 SHISA3A0PJX4 238 aa10.3□□□□□ -0.76
HDAC1-203ENST00000463172 LINC01548A6NM66 108 aa10.3□□□□□ -0.76
HDAC1-203ENST00000463172 RAB27BO00194 218 aa10.3□□□□□ -0.76
HDAC1-203ENST00000463172 MFNGO00587 321 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms