RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 PHF1O43189 567 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 HLA-AP01891 365 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 VSIG10L2P0DP72 767 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 ANXA3P12429 323 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 CCL3L1P16619 93 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 RAB7AP51149 207 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 PIGPP57054 158 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 GNMTQ14749 295 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 MORN2Q502X0 79 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 PRAMEF5Q5TYX0 476 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 ADAD2Q8NCV1 583 aaKnown RBP12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 AKR1E2Q96JD6 320 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 MED28Q9H204 178 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 GHITMQ9H3K2 345 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 CCL28Q9NRJ3 127 aa12.47□□□□□ -0.41
TMEM39A-203ENST00000461654 IGKV1D-13A0A0B4J2D9 117 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ITGB1BP1O14713 200 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ENSAO43768 121 aaKnown RBP12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 PFDN1O60925 122 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 FOXH1O75593 365 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 RBP4P02753 201 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 IGKV1-13P0DP09 117 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 GNRHRP30968 328 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 LOXL3P58215 753 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 PHLDA2Q53GA4 152 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 CADM3Q8N126 398 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ZBTB34Q8NCN2 500 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF431Q8TF32 576 aaPredicted RBP12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 CAPSLQ8WWF8 208 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 DMRTB1Q96MA1 342 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 SEC22CQ9BRL7 303 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 SLC2A9Q9NRM0 540 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ONECUT1Q9UBC0 465 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ZNF221Q9UK13 617 aa12.46□□□□□ -0.41
TMEM39A-203ENST00000461654 ANK3Q12955 4377 aaKnown RBP12.46□□□□□ -0.42
TMEM39A-203ENST00000461654 SONP18583 2426 aaKnown RBP12.46□□□□□ -0.42
TMEM39A-203ENST00000461654 RNF212BA8MTL3 300 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 TGFAP01135 160 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 LMO4P61968 165 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 DHRS2Q13268 280 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 PPP1R1AQ13522 171 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 MSMO1Q15800 293 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 Q3ZCU0 254 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF626Q68DY1 528 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 SPATA3Q8NHX4 192 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 RTN4IP1Q8WWV3 396 aaPredicted RBP12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 PHB2Q99623 299 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 OR2D2Q9H210 308 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 RNF150Q9ULK6 438 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 SESN1Q9Y6P5 492 aa12.45□□□□□ -0.42
TMEM39A-203ENST00000461654 C9orf170A2RU37 121 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 HMX3A6NHT5 357 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 CRYM-AS1A6NIL9 109 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 A8MXK9 166 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 SFT2D2O95562 160 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 IGHV1-8P0DP01 117 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 GPR12P47775 334 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 DLX6P56179 175 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 RND3P61587 244 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 RRAS2P62070 204 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 DHODHQ02127 395 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 ZNF818PQ6ZRF7 136 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 LINC01356Q8N9X3 169 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 UXS1Q8NBZ7 420 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 BVESQ8NE79 360 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 OR52B4Q8NGK2 314 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 COQ8AQ8NI60 647 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 CASTOR1Q8WTX7 329 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 ABHD14AQ9BUJ0 271 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 SUCNR1Q9BXA5 334 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 PARP12Q9H0J9 701 aaKnown RBP12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 NAA60Q9H7X0 242 aa12.44□□□□□ -0.42
TMEM39A-203ENST00000461654 C22orf46C9J442 243 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 M0R1W7 72 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 TOR1AO14656 332 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 MPPED1O15442 326 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 B3GALNT1O75752 331 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 DUS4LO95620 317 aaKnown RBP12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 CD34P28906 385 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 GNG10P50151 68 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 ERVFRD-1P60508 538 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 LCN2P80188 198 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 SLC9A3R2Q15599 337 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 BTNL3Q6UXE8 466 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 KCTD9Q7L273 389 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 TBC1D26Q86UD7 250 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 KIR3DL3Q8N743 410 aa12.43□□□□□ -0.42
TMEM39A-203ENST00000461654 TMEM230Q96A57 120 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms