RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 TMEM54Q969K7 222 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 BCL2P10415 239 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 PPOXP50336 477 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 SLC35E4Q6ICL7 350 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 BVESQ8NE79 360 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 MIEN1Q9BRT3 115 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 DOK5Q9P104 306 aa7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 ZMAT5Q9UDW3 170 aaKnown RBP7.31□□□□□ -1.24
MCF2L2-205ENST00000461074 ODAMA1E959 279 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 LINC00862A6NCI5 91 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 COX6CP09669 75 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 OR5AU1Q8NGC0 362 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 CLEC7AQ9BXN2 247 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 RABAC1Q9UI14 185 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 NINQ8N4C6 2090 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 CCDC88CQ9P219 2028 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 HSPB1P04792 205 aaKnown RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 ADRA2AP08913 450 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 Q6ZT83 130 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 GVQW1Q8N7I0 195 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 DDB2Q92466 427 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 SPNP16150 400 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 GLRXP35754 106 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 PMS2P11Q13670 270 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 C19orf54Q5BKX5 351 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 PRSS27Q9BQR3 290 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 A0A0G2JLM5 398 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 NKX2-6A6NCS4 301 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 FAM157AC9JC47 383 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 PHOX2AO14813 284 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 GHRHP01286 108 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 MAS1LP35410 378 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 SRSF5Q13243 272 aaKnown RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 ECSCRQ19T08 205 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 SLC22A18ASQ8N1D0 253 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 CTHRC1Q96CG8 243 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 ADAT3Q96EY9 351 aaPredicted RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 LPAR5Q9H1C0 372 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 COL11A1P12107 1806 aaPredicted RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 TRBV5-7A0A0A0MS05 114 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 ZNF207O43670 478 aaKnown RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 FABP4P15090 132 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 HSPE1P61604 102 aaKnown RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 RPS4XP62701 263 aaKnown RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 OR4D11Q8NGI4 311 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 SCN10AQ9Y5Y9 1956 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 MEF2CQ06413 473 aaPredicted RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 AESQ08117 197 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 TWIST1Q15672 202 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 C1QL3Q5VWW1 255 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 C16orf47Q6ZP98 133 aaPredicted RBP7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 ZPLD1Q8TCW7 415 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 FAM222BQ8WU58 562 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 NEURL2Q9BR09 285 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 CALYQ9NYX4 217 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 WDR90Q96KV7 1748 aa7.3□□□□□ -1.24
MCF2L2-205ENST00000461074 IGLV1-36A0A0B4J1U3 117 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 UBE2L6O14933 153 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 UPK3AO75631 287 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 PSG2P11465 335 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 MVDP53602 400 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 NUTF2P61970 127 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 SNRPD3P62318 126 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 ATP5G2Q06055 141 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 PIGYQ3MUY2 71 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 C16orf92Q96LL3 132 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 ZNF385AQ96PM9 386 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 GFRA3O60609 400 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 CSRP1P21291 193 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 PSMB2P49721 201 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 CXorf66Q5JRM2 361 aaPredicted RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 QTRT1Q9BXR0 403 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 RALYQ9UKM9 306 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 hCG_38984A0A1B0GV85 526 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 H7C1H1 209 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 G6PCP35575 357 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 MRPL24Q96A35 216 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 METTL1Q9UBP6 276 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 COLQQ9Y215 455 aaPredicted RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 HS3ST3B1Q9Y662 390 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 OR2H2O95918 312 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 FCARP24071 287 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 CA7P43166 264 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 RPS11P62280 158 aaKnown RBP eCLIP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 SAPCD1Q5SSQ6 148 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 FBLIM1Q8WUP2 373 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 CAMPP49913 170 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 CIRBPQ14011 172 aaKnown RBP7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 PCOLCEQ15113 449 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 VWA1Q6PCB0 445 aa7.29□□□□□ -1.24
MCF2L2-205ENST00000461074 TMEM88Q6PEY1 159 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms