RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TMEM56-RWDD3S4R434 201 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 ACANP16112 2415 aa4.04□□□□□ -1.76
ATPAF1-203ENST00000460928 RNF222A6NCQ9 220 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 FAM183AA6NL82 134 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 PPP5D1E7EU14 171 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 TNFRSF13BO14836 293 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SYT7O43581 403 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 TCF21O43680 179 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SSNA1O43805 119 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 MRPL33O75394 65 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE7O76087 117 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR2F2O95006 317 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GYPBP06028 91 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 UCHL1P09936 223 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 STAG3L2P0CL84 134 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 RD3LP0DJH9 198 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 B4GALT1P15291 398 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ADCYAP1P18509 176 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SRMP19623 302 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 CXCL3P19876 107 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 MSR1P21757 451 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GLRA1P23415 457 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 PYCR1P32322 319 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OPRM1P35372 400 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ACVR1BP36896 505 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 TGFBR1P36897 503 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 RPS27P42677 84 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 CDKN2AP42771 156 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 NPBWR1P48145 328 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF83P51522 516 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 CLDN12P56749 244 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 TMEM33P57088 247 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 NANOS2P60321 138 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 UBE2G2P60604 165 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 RPS4XP62701 263 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 NAAAQ02083 359 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 PJVKQ0ZLH3 352 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 MLLT11Q13015 90 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GAGE4Q13068 117 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR2F1Q13607 317 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 KIAA0141Q14154 515 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ARL6IP1Q15041 203 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GABRA6Q16445 453 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 CEACAM16Q2WEN9 425 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SLC25A35Q3KQZ1 300 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 NCMAPQ5T1S8 102 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF57Q68EA5 555 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 PRR27Q6MZM9 219 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF774Q6NX45 483 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SMARCD3Q6STE5 483 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ALKAL2Q6UX46 152 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF620Q6ZNG0 422 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 LINC01551Q86U37 167 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 C20orf196Q8IYI0 205 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 COMMD1Q8N668 190 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF433Q8N7K0 673 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 WDR31Q8NA23 367 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR51L1Q8NGJ5 315 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR10D4PQ8NGN7 298 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR6N1Q8NGY5 312 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR52N5Q8NH56 324 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ZNF519Q8TB69 540 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ASB5Q8WWX0 329 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 C11orf40Q8WZ69 217 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GGHQ92820 318 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 RNASE6Q93091 150 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 MGLLQ99685 303 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 NRIP2Q9BQI9 281 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ALKBH7Q9BT30 221 aaPredicted RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 SUCNR1Q9BXA5 334 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 TSSK6Q9BXA6 273 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 HCAR1Q9BXC0 346 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 POLR2J2Q9GZM3 115 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ARL6Q9H0F7 186 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 POLR2J3Q9H1A7 115 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ARV1Q9H2C2 271 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 OR52D1Q9H346 318 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 LIME1Q9H400 295 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ADGRL4Q9HBW9 690 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 UQCC1Q9NVA1 299 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 MRPL22Q9NWU5 206 aaKnown RBP4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 RASD1Q9Y272 281 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 GSTK1Q9Y2Q3 226 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 ARID1AO14497 2285 aa4.03□□□□□ -1.76
ATPAF1-203ENST00000460928 A0A1W2PPE3 182 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 KANTRA0A1W2PQU2 76 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 IRGMA1A4Y4 181 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 ANKRD61A6NGH8 418 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 TVP23AA6NH52 213 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 ZNF726A6NNF4 738 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 CTDSPLO15194 276 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 MAGEB4O15481 346 aaPredicted RBP4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 CYB5BO43169 146 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 NDUFB2O95178 105 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 SIX6O95475 246 aa4.02□□□□□ -1.77
ATPAF1-203ENST00000460928 CYB5R3P00387 301 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms