RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 EAF1Q96JC9 268 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-202ENST00000460308 NAA50Q9GZZ1 169 aaKnown RBP17.1■□□□□ 0.33
ABCD4-202ENST00000460308 C11orf54Q9H0W9 315 aaPredicted RBP17.1■□□□□ 0.33
ABCD4-202ENST00000460308 DCSTAMPQ9H295 470 aa17.1■□□□□ 0.33
ABCD4-202ENST00000460308 SAA2-SAA4A0A096LPE2 208 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 IGKV1-6A0A0C4DH72 117 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 GABARAPO95166 117 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 SAA2P0DJI9 122 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-202ENST00000460308 VDAC2P45880 294 aaPredicted RBP17.09■□□□□ 0.33
ABCD4-202ENST00000460308 EBI3Q14213 229 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 HERPUD1Q15011 391 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 IGSF11Q5DX21 431 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 C9orf152Q5JTZ5 239 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 UBE2NLQ5JXB2 153 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 SAMD12Q8N8I0 201 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 NUDCD2Q8WVJ2 157 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 GINS4Q9BRT9 223 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 IFI27L2Q9H2X8 130 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 RDH8Q9NYR8 311 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 ZNF221Q9UK13 617 aa17.09■□□□□ 0.33
ABCD4-202ENST00000460308 ANK2Q01484 3957 aa17.08■□□□□ 0.33
ABCD4-202ENST00000460308 NCBP2LA6PVI3 153 aaKnown RBP17.08■□□□□ 0.32
ABCD4-202ENST00000460308 DIRAS3O95661 229 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 MOSP00540 346 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 RORCP51449 518 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 FAM71F2Q6NXP2 309 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 Q6ZS46 218 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 Q6ZS49 121 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 ZNF833PQ6ZTB9 187 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 KLHDC1Q8N7A1 406 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 CITED1Q99966 193 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 CABLES2Q9BTV7 478 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 MRPL20Q9BYC9 149 aaKnown RBP17.08■□□□□ 0.32
ABCD4-202ENST00000460308 PARP12Q9H0J9 701 aaKnown RBP17.08■□□□□ 0.32
ABCD4-202ENST00000460308 ABCG5Q9H222 651 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 SERTAD4Q9NUC0 356 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 RNF150Q9ULK6 438 aa17.08■□□□□ 0.32
ABCD4-202ENST00000460308 ZNF736B4DX44 427 aaPredicted RBP17.07■□□□□ 0.32
ABCD4-202ENST00000460308 KRTAP10-3P60369 221 aa17.07■□□□□ 0.32
ABCD4-202ENST00000460308 LSAMPQ13449 338 aa17.07■□□□□ 0.32
ABCD4-202ENST00000460308 CTF1Q16619 201 aa17.07■□□□□ 0.32
ABCD4-202ENST00000460308 AGMATQ9BSE5 352 aa17.07■□□□□ 0.32
ABCD4-202ENST00000460308 COMMD3Q9UBI1 195 aa17.07■□□□□ 0.32
ABCD4-202ENST00000460308 TRBV6-7A0A0A0MS04 114 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 SH2D7A6NKC9 451 aaPredicted RBP17.06■□□□□ 0.32
ABCD4-202ENST00000460308 FGF16O43320 207 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 XRCC3O43542 346 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 AMY1AP04745 511 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 AMY2AP04746 511 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 CTXN2P0C2S0 81 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 GPR12P47775 334 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 RPL39P5Q59GN2 51 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 ACOT12Q8WYK0 555 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 NABP2Q9BQ15 211 aa17.06■□□□□ 0.32
ABCD4-202ENST00000460308 RBM7Q9Y580 266 aaKnown RBP17.06■□□□□ 0.32
ABCD4-202ENST00000460308 IGKV1D-8A0A087WSZ0 117 aa17.05■□□□□ 0.32
ABCD4-202ENST00000460308 RPL5P46777 297 aaKnown RBP17.05■□□□□ 0.32
ABCD4-202ENST00000460308 CLVS1Q8IUQ0 354 aaPredicted RBP17.05■□□□□ 0.32
ABCD4-202ENST00000460308 C5orf56Q8N8D9 126 aa17.05■□□□□ 0.32
ABCD4-202ENST00000460308 OR8H1Q8NGG4 311 aa17.05■□□□□ 0.32
ABCD4-202ENST00000460308 TOLLIPQ9H0E2 274 aa17.05■□□□□ 0.32
ABCD4-202ENST00000460308 AUNIPQ9H7T9 357 aa17.05■□□□□ 0.32
ABCD4-202ENST00000460308 SMIM31A0A1B0GVY4 71 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 SSX5O60225 188 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 OR8U9P0C7N5 309 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 TMEM95Q3KNT9 176 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 TMEM69Q5SWH9 247 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 MZT2AQ6P582 158 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 Q8N6K4 173 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 OR8U1Q8NH10 309 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 AP3S1Q92572 193 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 ZNF251Q9BRH9 671 aa17.04■□□□□ 0.32
ABCD4-202ENST00000460308 CNIH2Q6PI25 160 aa17.03■□□□□ 0.32
ABCD4-202ENST00000460308 CENPVQ7Z7K6 275 aaPredicted RBP17.03■□□□□ 0.32
ABCD4-202ENST00000460308 C11orf44Q8N8P7 122 aa17.03■□□□□ 0.32
ABCD4-202ENST00000460308 CMTM3Q96MX0 182 aa17.03■□□□□ 0.32
ABCD4-202ENST00000460308 RASL11BQ9BPW5 248 aa17.03■□□□□ 0.32
ABCD4-202ENST00000460308 CT45A6P0DMU7 189 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 CT45A5P0DMU8 189 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 CT45A7P0DMV0 189 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 ZNF182P17025 639 aaPredicted RBP17.02■□□□□ 0.32
ABCD4-202ENST00000460308 MC5RP33032 325 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 CBX5P45973 191 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.02■□□□□ 0.32
ABCD4-202ENST00000460308 OR2D2Q9H210 308 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 SCOCQ9UIL1 159 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 ANXA10Q9UJ72 324 aa17.02■□□□□ 0.32
ABCD4-202ENST00000460308 OR5H14A6NHG9 310 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 H7C2Y5 167 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 M0QZ24 198 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 NOL3O60936 208 aaKnown RBP17.01■□□□□ 0.31
ABCD4-202ENST00000460308 APOA1P02647 267 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 ARPC4P59998 168 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 ACTBP60709 375 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 GLDNQ6ZMI3 551 aaPredicted RBP17.01■□□□□ 0.31
ABCD4-202ENST00000460308 H1FOOQ8IZA3 346 aaPredicted RBP17.01■□□□□ 0.31
ABCD4-202ENST00000460308 Q8N9W7 124 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 BEST4Q8NFU0 473 aa17.01■□□□□ 0.31
ABCD4-202ENST00000460308 RAB2BQ8WUD1 216 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms