RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 MOGAT2Q3SYC2 334 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 KHDC1LQ5JSQ8 128 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 NR2C2APQ86WQ0 139 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 STPG2Q8N412 459 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 FAM71E2Q8N5Q1 922 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 KCNK7Q9Y2U2 307 aa18.16■□□□□ 0.5
PTPN4-208ENST00000460289 RAB27BO00194 218 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 SOX6P35712 828 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 ARL6IP1Q15041 203 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 MMDQ15546 238 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 C1QL4Q86Z23 238 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 PHF21AQ96BD5 680 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 KCTD7Q96MP8 289 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 AGMATQ9BSE5 352 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 C11orf54Q9H0W9 315 aaPredicted RBP18.15■□□□□ 0.5
PTPN4-208ENST00000460289 OR1A1Q9P1Q5 309 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 LINC00527Q9UJ94 153 aa18.15■□□□□ 0.5
PTPN4-208ENST00000460289 A0A0B4J203 849 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 LINC01548A6NM66 108 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 SLC2A2P11168 524 aaPredicted RBP18.14■□□□□ 0.49
PTPN4-208ENST00000460289 GNB3P16520 340 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 SERPINB10P48595 397 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 ACTBP60709 375 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 KIR2DS1Q14954 304 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 PDLIM3Q53GG5 364 aaPredicted RBP18.14■□□□□ 0.49
PTPN4-208ENST00000460289 OR4A4PQ8NGN8 299 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 ZNF251Q9BRH9 671 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 ATG5Q9H1Y0 275 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 OR51E2Q9H255 320 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 ZFP57Q9NU63 452 aa18.14■□□□□ 0.49
PTPN4-208ENST00000460289 A0A075B6Q4 140 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 SMIM30A4D0T7 59 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 MFNGO00587 321 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 RRP9O43818 475 aaKnown RBP18.13■□□□□ 0.49
PTPN4-208ENST00000460289 HIST1H1DP16402 221 aaKnown RBP18.13■□□□□ 0.49
PTPN4-208ENST00000460289 MC5RP33032 325 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 NEDD8Q15843 81 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 SAMD5Q5TGI4 173 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 TEX38Q6PEX7 206 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 ABHD14BQ96IU4 210 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 CENPOQ9BU64 300 aa18.13■□□□□ 0.49
PTPN4-208ENST00000460289 G3V4G9 280 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 PF4P02776 101 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 FCGR3AP08637 254 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 PNLIPRP3Q17RR3 467 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 RPL39P5Q59GN2 51 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 WFDC9Q8NEX5 89 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 RBMXL1Q96E39 390 aaKnown RBP18.12■□□□□ 0.49
PTPN4-208ENST00000460289 CHCHD6Q9BRQ6 235 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 PARP12Q9H0J9 701 aaKnown RBP18.12■□□□□ 0.49
PTPN4-208ENST00000460289 DAPK2Q9UIK4 370 aa18.12■□□□□ 0.49
PTPN4-208ENST00000460289 IGKV1-6A0A0C4DH72 117 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 OR5H14A6NHG9 310 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 FABP7O15540 132 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 CT45A6P0DMU7 189 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 CT45A5P0DMU8 189 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 CT45A7P0DMV0 189 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 CD36P16671 472 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 CD33P20138 364 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 SLC6A1P30531 599 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 SDC2P34741 201 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 TALDO1P37837 337 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 ARFRP1Q13795 201 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 NPBQ8NG41 125 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 RITA1Q96K30 269 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 TOLLIPQ9H0E2 274 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 RDH8Q9NYR8 311 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 ZNF107Q9UII5 783 aaPredicted RBP18.11■□□□□ 0.49
PTPN4-208ENST00000460289 ZNF221Q9UK13 617 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 PLXNB1O43157 2135 aa18.11■□□□□ 0.49
PTPN4-208ENST00000460289 NBR2O15453 112 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 SCGNO76038 276 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 DIRAS3O95661 229 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 IGF1P05019 195 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 RPL23AP62750 156 aaKnown RBP18.1■□□□□ 0.49
PTPN4-208ENST00000460289 SRSF7Q16629 238 aaKnown RBP eCLIP18.1■□□□□ 0.492e-8■■■■■ 27
PTPN4-208ENST00000460289 SFXN4Q6P4A7 337 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 OR10J5Q8NHC4 309 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 HSPB9Q9BQS6 159 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 KIAA1456Q9P272 454 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 RNF150Q9ULK6 438 aa18.1■□□□□ 0.49
PTPN4-208ENST00000460289 LOC100506127A0A0U1RQW1 187 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 GSTT2P0CG29 244 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 GSTT2BP0CG30 244 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 OR5H8P0DN80 308 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 VDAC1P21796 283 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 BEAN1Q3B7T3 259 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 CDNFQ49AH0 187 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 KPRPQ5T749 579 aaPredicted RBP18.09■□□□□ 0.49
PTPN4-208ENST00000460289 FAM131AQ6UXB0 335 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 OR5AN1Q8NGI8 311 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.09■□□□□ 0.49
PTPN4-208ENST00000460289 ZNF580Q9UK33 172 aa18.09■□□□□ 0.49
PTPN4-208ENST00000460289 H7C2Y5 167 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 BET1O15155 118 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 RBBP9O75884 186 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 HLA-DRB1P01911 266 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 C5orf64Q2M2E5 130 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 OXLD1Q5BKU9 147 aa18.08■□□□□ 0.48
PTPN4-208ENST00000460289 IGSF11Q5DX21 431 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms