RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 EDARADDQ8WWZ3 215 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 HIST1H2BHQ93079 126 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 ANAPC16Q96DE5 110 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 FAM210BQ96KR6 192 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 CIB3Q96Q77 187 aaPredicted RBP5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 HIST1H2BNQ99877 126 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 HIST1H2BMQ99879 126 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 PRRG4Q9BZD6 226 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 WDR61Q9GZS3 305 aaKnown RBP5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 SRD5A3Q9H8P0 318 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 CDH20Q9HBT6 801 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 MANBALQ9NQG1 85 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 LRFN1Q9P244 771 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 HSPB7Q9UBY9 170 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 OR14J1Q9UGF5 321 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 NAT8Q9UHE5 227 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 TINAGQ9UJW2 476 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 PITPNC1Q9UKF7 332 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 ASPMQ8IZT6 3477 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 MED13Q9UHV7 2174 aa5.19□□□□□ -1.58
UBQLN4-202ENST00000459954 IGF2RP11717 2491 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CACNA1DQ01668 2161 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 A0A0G2JRQ6 117 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CTXND1A0A1B0GTU2 59 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 A0A1W2PNU3 283 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SMCO3A2RU48 225 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PINLYPA6NC86 204 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 FAM90A9PA6NNJ1 464 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ZNF727A8MUV8 499 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SH2D1BO14796 132 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PHOX2AO14813 284 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 RAB29O14966 203 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PPP1R2P9O14990 202 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CYB5BO43169 146 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 KLK10O43240 276 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SYNGR1O43759 233 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 NEURL1O76050 574 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 WISP2O76076 250 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 IGKV1-39P01597 117 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 IGKV1-5P01602 117 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 IGLV2-14P01704 120 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 HLA-HP01893 362 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 IGKV1D-39P04432 117 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PFN1P07737 140 aaKnown RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 P0C879 139 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 HIST1H1BP16401 226 aaKnown RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ITGA3P26006 1051 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 OTX2P32243 289 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ASCL1P50553 236 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 NDUFA6P56556 154 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 NKX6-1P78426 367 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 RUNX1Q01196 453 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PAX5Q02548 391 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CLN3Q13286 438 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 MRPL49Q13405 166 aaKnown RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 EIF4EBP1Q13541 118 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TGIF1Q15583 401 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ZNF726P1Q15940 193 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TMEM241Q24JQ0 296 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 VWC2Q2TAL6 325 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ABHD17BQ5VST6 288 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 WDR25Q64LD2 544 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SLC35E4Q6ICL7 350 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CFAP161Q6P656 301 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 C20orf204Q6ZNR8 217 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 Q6ZRM9 215 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SPACA3Q8IXA5 215 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TUSC5Q8IXB3 177 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 C1orf174Q8IYL3 243 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TMEM217Q8N7C4 229 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 OR1K1Q8NGR3 316 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 OR5R1Q8NH85 324 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 RNASE11Q8TAA1 199 aaKnown RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PRR7Q8TB68 274 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TAF15Q92804 592 aaKnown RBP eCLIP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 BCL2L2Q92843 193 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 FER1L6-AS2Q96M78 137 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 DIRC2Q96SL1 478 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TXNDC17Q9BRA2 123 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TMEM147Q9BVK8 224 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 ZNF552Q9H707 407 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CHODLQ9H9P2 273 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 SLC39A9Q9NUM3 307 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 PPP1R14DQ9NXH3 145 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 KCNIP1Q9NZI2 227 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 GNG13Q9P2W3 67 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 CACNG5Q9UF02 275 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 KLF13Q9Y2Y9 288 aaPredicted RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 HEATR1Q9H583 2144 aaKnown RBP5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 WDFY3Q8IZQ1 3526 aa5.18□□□□□ -1.58
UBQLN4-202ENST00000459954 TGIF2-C20orf24A0A0A6YYL0 155 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 MAP1LC3B2A6NCE7 125 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 OOEPA6NGQ2 149 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 OR5H1A6NKK0 313 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 IFITM10A6NMD0 228 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 IQCF6A8MYZ5 107 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 KLRC4-KLRK1H3BQV0 150 aa5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 SLC33A1O00400 549 aaPredicted RBP5.17□□□□□ -1.58
UBQLN4-202ENST00000459954 DVL1O14640 695 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms