RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CLDN1O95832 211 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 CYB5R3P00387 301 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 IGKV1-5P01602 117 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 IGLV2-14P01704 120 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 IGHV2-5P01817 119 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF16P17020 682 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 TMEM267Q0VDI3 215 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF585BQ52M93 769 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 IGF2-ASQ6U949 168 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 IGFL2Q6UWQ7 119 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 DHRS13Q6UX07 377 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 WDR86Q86TI4 376 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 ZFP82Q8N141 532 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 FGFRL1Q8N441 504 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 FAM24BQ8N5W8 94 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 CYB561D1Q8N8Q1 229 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 KLF14Q8TD94 323 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 TAF15Q92804 592 aaKnown RBP eCLIP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 YPEL4Q96NS1 127 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 NCOR1P1Q9H4R4 102 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 ESRP2Q9H6T0 727 aaKnown RBP7.46□□□□□ -1.22
HDAC3-202ENST00000459727 GNG13Q9P2W3 67 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 NCKAP5O14513 1909 aa7.46□□□□□ -1.22
HDAC3-202ENST00000459727 CACNA1GO43497 2377 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 CTXND1A0A1B0GTU2 59 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1W2PNU3 283 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1W2PPE2 198 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1W2PR80 420 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 MAP1LC3B2A6NCE7 125 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ITGB1BP1O14713 200 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 CDIPTO14735 213 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RBFOX2O43251 390 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC3-202ENST00000459727 TIMM8AO60220 97 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-202ENST00000459727 LILRA1O75019 489 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 IGKV1-39P01597 117 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 IGKV1D-39P04432 117 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 GRPP07492 148 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 METTL15P1P0C7V9 234 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 P0C879 139 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 GZMHP20718 246 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 S100PP25815 95 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 CFHR2P36980 270 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 PSMB3P49720 205 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ASCL1P50553 236 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RND2P52198 227 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 DLK1P80370 383 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RUNX1Q01196 453 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 FABP9Q0Z7S8 132 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 PSG7Q13046 419 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 TGIF1Q15583 401 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 C3AR1Q16581 482 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 TMEM249Q2WGJ8 235 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 SPANXN5Q5MJ07 72 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 DNLZQ5SXM8 178 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 SPATA46Q5T0L3 261 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ADAM5Q6NVV9 412 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ACP7Q6ZNF0 438 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 H2BFWTQ7Z2G1 175 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ODF3L1Q8IXM7 274 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ZNF610Q8N9Z0 462 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RCC1LQ96I51 464 aaKnown RBP7.45□□□□□ -1.22
HDAC3-202ENST00000459727 TRIB1Q96RU8 372 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RARRES2Q99969 163 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 TXNDC17Q9BRA2 123 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 C20orf24Q9BUV8 137 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 GGACTQ9BVM4 153 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-202ENST00000459727 MAP1LC3BQ9GZQ8 125 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 OR2D2Q9H210 308 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 RPRMQ9NS64 109 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 JPT1Q9UK76 154 aa7.45□□□□□ -1.22
HDAC3-202ENST00000459727 ACACBO00763 2458 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 hCG_1809904A0A1W2PP81 198 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1W2PR64 198 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 A0A1W2PRV1 198 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 SEC14L6B5MCN3 397 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 C12orf77C9JDV5 145 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 H3BP45 60 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 EIF3GO75821 320 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDAC3-202ENST00000459727 IGLV1-44P01699 117 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 HBZP02008 142 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 IAPPP10997 89 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 S100A2P29034 98 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 AKR1C3P42330 323 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 RPS10P46783 165 aaKnown RBP7.44□□□□□ -1.22
HDAC3-202ENST00000459727 GABRA2P47869 451 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 OR3A1P47881 315 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 RAB7AP51149 207 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 ERVK-16P61578 105 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 B2MP61769 119 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 RAB11AP62491 216 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 GNB2P62879 340 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 CTAG1AP78358 180 aa7.44□□□□□ -1.22
HDAC3-202ENST00000459727 CCL20P78556 96 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms