RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TFAP2AP05549 437 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 GSTP1P09211 210 aaKnown RBP16.48■□□□□ 0.23
VARS-218ENST00000459667 CEACAM6P40199 344 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 OR3A3P47888 321 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 KIR2DS1Q14954 304 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 CDNFQ49AH0 187 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 GPR107Q5VW38 600 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 ZNF833PQ6ZTB9 187 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 OR5H6Q8NGV6 325 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 SLC25A46Q96AG3 418 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 KCTD12Q96CX2 325 aaKnown RBP16.48■□□□□ 0.23
VARS-218ENST00000459667 MRPL20Q9BYC9 149 aaKnown RBP16.48■□□□□ 0.23
VARS-218ENST00000459667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.48■□□□□ 0.23
VARS-218ENST00000459667 DIABLOQ9NR28 239 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 PIPOXQ9P0Z9 390 aa16.48■□□□□ 0.23
VARS-218ENST00000459667 MGAM2Q2M2H8 2515 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 IGKV1-6A0A0C4DH72 117 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 NCBP2LA6PVI3 153 aaKnown RBP16.47■□□□□ 0.23
VARS-218ENST00000459667 ITGB1BP1O14713 200 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 FABP7O15540 132 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 TSPAN15O95858 294 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 CD28P10747 220 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 PITPNAQ00169 270 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 OR4A4PQ8NGN8 299 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 EDARADDQ8WWZ3 215 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 MMP27Q9H306 513 aa16.47■□□□□ 0.23
VARS-218ENST00000459667 RAB29O14966 203 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 CSF1P09603 554 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 GNG2P59768 71 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 HACD4Q5VWC8 232 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 FAM71F2Q6NXP2 309 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 MAFIPQ8WZ33 124 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 SLC25A38Q96DW6 304 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 RBMXL1Q96E39 390 aaKnown RBP16.46■□□□□ 0.23
VARS-218ENST00000459667 S1PR3Q99500 378 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 NABP2Q9BQ15 211 aa16.46■□□□□ 0.23
VARS-218ENST00000459667 C11orf54Q9H0W9 315 aaPredicted RBP16.46■□□□□ 0.23
VARS-218ENST00000459667 ZNF230Q9UIE0 474 aaPredicted RBP16.46■□□□□ 0.23
VARS-218ENST00000459667 ELF5Q9UKW6 265 aaPredicted RBP16.46■□□□□ 0.23
VARS-218ENST00000459667 DTYMKP23919 212 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 RORCP51449 518 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 SRSF7Q16629 238 aaKnown RBP eCLIP16.45■□□□□ 0.22
VARS-218ENST00000459667 PNLIPRP3Q17RR3 467 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 UBE2NLQ5JXB2 153 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 CENPVQ7Z7K6 275 aaPredicted RBP16.45■□□□□ 0.22
VARS-218ENST00000459667 OR5AU1Q8NGC0 362 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 OR8H1Q8NGG4 311 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 ABHD14BQ96IU4 210 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 AGMATQ9BSE5 352 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 CABLES2Q9BTV7 478 aa16.45■□□□□ 0.22
VARS-218ENST00000459667 NAA50Q9GZZ1 169 aaKnown RBP16.45■□□□□ 0.22
VARS-218ENST00000459667 WNK1Q9H4A3 2382 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 PKD1L1Q8TDX9 2849 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 BET1O15155 118 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 GSTT2P0CG29 244 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 GSTT2BP0CG30 244 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 RPL5P46777 297 aaKnown RBP16.44■□□□□ 0.22
VARS-218ENST00000459667 CTF1Q16619 201 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 RPL39P5Q59GN2 51 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 IGSF11Q5DX21 431 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 Q8N9W7 124 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 S100A16Q96FQ6 103 aaKnown RBP16.44■□□□□ 0.22
VARS-218ENST00000459667 CITED2Q99967 270 aaPredicted RBP16.44■□□□□ 0.22
VARS-218ENST00000459667 ZNF251Q9BRH9 671 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 GHITMQ9H3K2 345 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 PLSCR3Q9NRY6 295 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 LIN7CQ9NUP9 197 aaKnown RBP16.44■□□□□ 0.22
VARS-218ENST00000459667 RDH8Q9NYR8 311 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 SCOCQ9UIL1 159 aa16.44■□□□□ 0.22
VARS-218ENST00000459667 TRAV18A0A075B6X5 111 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 TMEM235A6NFC5 223 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 NOL3O60936 208 aaKnown RBP16.43■□□□□ 0.22
VARS-218ENST00000459667 DIRAS3O95661 229 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 ZNF260Q3ZCT1 412 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 SLC35E3Q7Z769 313 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 SAMD12Q8N8I0 201 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 FAM110DQ8TAY7 271 aaPredicted RBP16.43■□□□□ 0.22
VARS-218ENST00000459667 ACOT12Q8WYK0 555 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 AP3S1Q92572 193 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 ABCG5Q9H222 651 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 DCSTAMPQ9H295 470 aa16.43■□□□□ 0.22
VARS-218ENST00000459667 IGHG2P01859 326 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 MMDQ15546 238 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 NSUN5P1Q3KNT7 163 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 Q6ZS49 121 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 NDUFA11Q86Y39 141 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 CLVS1Q8IUQ0 354 aaPredicted RBP16.42■□□□□ 0.22
VARS-218ENST00000459667 OR10J5Q8NHC4 309 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 RAB2BQ8WUD1 216 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 NUDCD2Q8WVJ2 157 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 RASL11BQ9BPW5 248 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 TOLLIPQ9H0E2 274 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 ZNF221Q9UK13 617 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 RNF150Q9ULK6 438 aa16.42■□□□□ 0.22
VARS-218ENST00000459667 TRBV6-7A0A0A0MS04 114 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 GPR12P47775 334 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 F2RL1P55085 397 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 ACTBP60709 375 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 MZT2AQ6P582 158 aa16.41■□□□□ 0.22
VARS-218ENST00000459667 C10orf99Q6UWK7 81 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms