RNA–Protein interactions for RNA: ENST00000458420.7

CLSTN2-201, Transcript of calsyntenin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLSTN2, Length 14,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN2-201ENST00000458420 MAP1LC3B2A6NCE7 125 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 J3QKU1 62 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 CORTO00230 105 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 UPK3AO75631 287 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 OTX1P32242 354 aaPredicted RBP6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 RELQ04864 619 aaPredicted RBP6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 LINC01555Q8NAE3 123 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 MAP1LC3BQ9GZQ8 125 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 RNF122Q9H9V4 155 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 EP300Q09472 2414 aaPredicted RBP6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 RAF1P04049 648 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 CKS2P33552 79 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 DIRC3C9JPN6 131 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 HSPB1P04792 205 aaKnown RBP6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 CISD3P0C7P0 127 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 LIMS3P0CW19 117 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 LIMS4P0CW20 117 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF880Q6PDB4 577 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 DHRS4L2Q6PKH6 230 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF696Q9H7X3 374 aa6.12□□□□□ -1.43
CLSTN2-201ENST00000458420 RPL27AP46776 148 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 HSF4Q9ULV5 492 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PAPPA2Q9BXP8 1791 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 A0A0U1RRA0 63 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 SYNGR1O43759 233 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 GABRA6Q16445 453 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 DNLZQ5SXM8 178 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 DMRTA1Q5VZB9 504 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 SMIM19Q96E16 107 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 MGAT2Q10469 447 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 FAM159AQ6UWV7 190 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF429Q86V71 674 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TNFRSF18Q9Y5U5 241 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ARRDC5A6NEK1 342 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 SPSB4Q96A44 273 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PDFQ9HBH1 243 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 NAT8Q9UHE5 227 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 GZMHP20718 246 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 CDKN2AP42771 156 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 MMP16P51512 607 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF324BQ6AW86 544 aaPredicted RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ZCCHC24Q8N2G6 241 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 STPG3Q8N7X2 389 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 F11RQ9Y624 299 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 IGHV3-73A0A0B4J1V6 119 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 GPX5O75715 221 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 HIST3H3Q16695 136 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 NANOGP1Q8N7R0 232 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 OR13A1Q8NGR1 328 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PP6455Q8WZ26 134 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 LAMB4A4D0S4 1761 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ANXA2RQ3ZCQ2 193 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 GAPTQ8N292 157 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PEMTQ9UBM1 199 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 FAM166AQ6J272 317 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PRO1933Q9H354 126 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 PSG2P11465 335 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 SUCLG1P53597 346 aaKnown RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TMEM18Q96B42 140 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ADTRPQ96IZ2 230 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF831Q5JPB2 1677 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TRDV1A0A1B0GX56 115 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 HYPMO75409 117 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 EIF3GO75821 320 aaKnown RBP eCLIP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 NKX6-2Q9C056 277 aaPredicted RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 CCL28Q9NRJ3 127 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TMEM38BQ9NVV0 291 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TRAV12-3A0A0B4J271 114 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 C1QTNF9BB2RNN3 333 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 TSPAN2O60636 221 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 IGHV3-53P01767 116 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 C1QTNF9P0C862 333 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF343Q6P1L6 599 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 OR5H6Q8NGV6 325 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 HDHD3Q9BSH5 251 aaPredicted RBP6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 FOXJ3Q9UPW0 622 aa6.11□□□□□ -1.43
CLSTN2-201ENST00000458420 DDX60Q8IY21 1712 aaKnown RBP6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 A6NDN8 102 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 OR2A4O95047 310 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 OR2A7Q96R45 310 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 SYNGR3O43761 229 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 CD1AP06126 327 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 HIST1H1DP16402 221 aaKnown RBP6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 KLF9Q13886 244 aaPredicted RBP6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 DDA1Q9BW61 102 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 LPAR3Q9UBY5 353 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 M0R381 172 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 TMEM219Q86XT9 240 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 PDCD11Q14690 1871 aaKnown RBP6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 ZNF485Q8NCK3 441 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 TRAV21A0A0B4J279 112 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 DOCK3Q8IZD9 2030 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 IFITM5A6NNB3 132 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 SLC35E3Q7Z769 313 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 KLHDC8BQ8IXV7 354 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 PLEKHA2Q9HB19 425 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 AKIP1Q9NQ31 210 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 AP4M1O00189 453 aa6.1□□□□□ -1.43
CLSTN2-201ENST00000458420 TAAR5O14804 337 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms