RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PTPRSQ13332 1948 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 PLXND1Q9Y4D7 1925 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
VPS41-209ENST00000457055 ATAD5Q96QE3 1844 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR2M5A3KFT3 312 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 ZNF705EA8MWA4 302 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 CCL24O00175 119 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR2T1O43869 369 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TBL1XO60907 577 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TOXO94900 526 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 NDUFC2O95298 119 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR2H2O95918 312 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 NHLRC4P0CG21 123 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 FAM106CPP0CH98 169 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 CT45A10P0DMU9 189 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 ZNF19P17023 458 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 CHRNB2P17787 502 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 NTF3P20783 257 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 IL2RGP31785 369 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TNFSF8P32971 234 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 GALR1P47211 349 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 RPL29P47914 159 aaKnown RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 LHX2P50458 406 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 WDR5P61964 334 aaKnown RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 MEF2BQ02080 365 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 RBM39Q14498 530 aaKnown RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 IQCJQ1A5X6 159 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 FAM106AQ4KMX7 169 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TCEAL5Q5H9L2 206 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 BCL2L15Q5TBC7 163 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 EPGNQ6UW88 154 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 ZNF705AQ6ZN79 300 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 PRSS41Q7RTY9 318 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 SERPINA11Q86U17 422 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 GKN2Q86XP6 184 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TMEM219Q86XT9 240 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 CDC20BQ86Y33 519 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 C1orf158Q8N1D5 194 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TEX45Q8NA69 505 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TMEM178AQ8NBL3 297 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR10AD1Q8NGE0 317 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR8D4Q8NGM9 314 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR1L1Q8NH94 360 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 RHOXF1Q8NHV9 184 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 PIFOQ8TCI5 191 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 GPR148Q8TDV2 347 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 BLNKQ8WV28 456 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 SECTM1Q8WVN6 248 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 PP6455Q8WZ26 134 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 EEF1AKMT3Q96AZ1 226 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 CLDN23Q96B33 292 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TMEM101Q96IK0 257 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 BTN2A3PQ96KV6 586 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TEX37Q96LM6 180 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 RDH12Q96NR8 316 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 MIEN1Q9BRT3 115 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR2H1Q9GZK4 316 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR8D2Q9GZM6 311 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 MED28Q9H204 178 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 OR52D1Q9H346 318 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TUBA4BQ9H853 241 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 MOB1AQ9H8S9 216 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 REEP1Q9H902 201 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 NOX3Q9HBY0 568 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 SLC25A19Q9HC21 320 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 CBLN4Q9NTU7 201 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 DMAC2Q9NW81 257 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 ANXA10Q9UJ72 324 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 MMP17Q9ULZ9 603 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 EP300Q09472 2414 aaPredicted RBP4.47□□□□□ -1.69
VPS41-209ENST00000457055 USP24Q9UPU5 2620 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 DENND4AQ7Z401 1863 aa4.47□□□□□ -1.69
VPS41-209ENST00000457055 TRIP12Q14669 1992 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 COL4A4P53420 1690 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 DUXBA0A1W2PPF3 345 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 A1L4Q6 167 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 SRRM4A7MD48 611 aaKnown RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 COLCA2A8K830 154 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 EEF1E1-BLOC1S5C9J1V9 151 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 PRYO14603 147 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 EEF1E1O43324 174 aaKnown RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 BUB3O43684 328 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ZNF354AO60765 605 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 TBX6O95947 436 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 CD59P13987 128 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 RAB5AP20339 215 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 BCL3P20749 454 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 CNTFRP26992 372 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 TGFBR1P36897 503 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 ELK3P41970 407 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 HOXC5Q00444 222 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 IFITM3Q01628 133 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 MEF2CQ06413 473 aaPredicted RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 ARL16Q0P5N6 197 aa4.46□□□□□ -1.7
VPS41-209ENST00000457055 PAFAH1B3Q15102 231 aaKnown RBP4.46□□□□□ -1.7
VPS41-209ENST00000457055 TIMM50Q3ZCQ8 353 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms