RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 NFYBP25208 207 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 GLP1RP43220 463 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 MEF2DQ14814 521 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 HIST2H2BDQ6DRA6 164 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 STEAP1BQ6NZ63 245 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 HEPN1Q6WQI6 88 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 LYG1Q8N1E2 194 aa17.4■□□□□ 0.38
C9orf3-208ENST00000451893 SLC33A1O00400 549 aaPredicted RBP17.39■□□□□ 0.37
C9orf3-208ENST00000451893 SSX5O60225 188 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 MMP23AO75900 390 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 CSN2P05814 226 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 LMO1P25800 156 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 NKAPLQ5M9Q1 402 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 LDLRAD2Q5SZI1 272 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 C6orf201Q7Z4U5 140 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 HOGA1Q86XE5 327 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 OR4P4Q8NGL7 312 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 NUDCD2Q8WVJ2 157 aa17.39■□□□□ 0.37
C9orf3-208ENST00000451893 ZNF729A6NN14 1252 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-208ENST00000451893 MCRIP1C9JLW8 97 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 SRSF7Q16629 238 aaKnown RBP eCLIP17.38■□□□□ 0.37
C9orf3-208ENST00000451893 C16orf82Q7Z2V1 217 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 ZNF565Q8N9K5 539 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 CFHR4Q92496 578 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 CORO2AQ92828 525 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 CMSS1Q9BQ75 279 aaKnown RBP17.38■□□□□ 0.37
C9orf3-208ENST00000451893 FAAP24Q9BTP7 215 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 ELF5Q9UKW6 265 aaPredicted RBP17.38■□□□□ 0.37
C9orf3-208ENST00000451893 NUBP2Q9Y5Y2 271 aa17.38■□□□□ 0.37
C9orf3-208ENST00000451893 MEIKINA0A087WXM9 373 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 RAB3DO95716 219 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 OPN1MWP04001 364 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 OPN1MW2P0DN77 364 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 OPN1MW3P0DN78 364 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 CD28P10747 220 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 ATAD3CQ5T2N8 411 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 CCDC144NLQ6NUI1 221 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 Q6P435 159 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 OR4F17Q8NGA8 305 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 R3HDM4Q96D70 268 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 OR4F4Q96R69 305 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 SULT4A1Q9BR01 284 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 MARVELD1Q9BSK0 173 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 SERTAD4Q9NUC0 356 aa17.37■□□□□ 0.37
C9orf3-208ENST00000451893 AMMECR1Q9Y4X0 333 aaPredicted RBP17.37■□□□□ 0.37
C9orf3-208ENST00000451893 A0A1B0GVG6 124 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 DISC1C4P0D8 188 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 MT-ND4P03905 459 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 CD3DP04234 171 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 SPNP16150 400 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 CD24P25063 80 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 BTCP35070 178 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 TAS2R46P59540 309 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 Q8N2B8 174 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 RPEQ96AT9 228 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 ZNF286AQ9HBT8 521 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 AK3Q9UIJ7 227 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 SCP2D1Q9UJQ7 156 aa17.36■□□□□ 0.37
C9orf3-208ENST00000451893 MEIS3P1A6NDR6 274 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 TCRBP04435 133 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 BLCAPP62952 87 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 LTC4SQ16873 150 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 HLA-DRB5Q30154 266 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 RNASE10Q5GAN6 216 aaKnown RBP17.35■□□□□ 0.37
C9orf3-208ENST00000451893 C9orf152Q5JTZ5 239 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 NDUFA11Q86Y39 141 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 OR4C16Q8NGL9 310 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 COQ2Q96H96 371 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 SLC25A33Q9BSK2 321 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 C12orf4Q9NQ89 552 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 MCUBQ9NWR8 336 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 KIF25Q9UIL4 384 aa17.35■□□□□ 0.37
C9orf3-208ENST00000451893 KBTBD11-OT1A0A1B0GTJ5 212 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 KCNJ3P48549 501 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 TMEM95Q3KNT9 176 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 VAX1Q5SQQ9 334 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 Q6ZS49 121 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 CENPVQ7Z7K6 275 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-208ENST00000451893 BEST4Q8NFU0 473 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 OR4K15Q8NH41 348 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 OR9G1Q8NH87 305 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 NEK7Q8TDX7 302 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 TOMM40LQ969M1 308 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 PRRT1Q99946 306 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 SLC25A21Q9BQT8 299 aaPredicted RBP17.34■□□□□ 0.37
C9orf3-208ENST00000451893 SLC2A8Q9NY64 477 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 CALYQ9NYX4 217 aa17.34■□□□□ 0.37
C9orf3-208ENST00000451893 TRBV6-6A0A0A6YYG2 114 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 A0A1W2PRX2 142 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 BUB1B-PAK6H3BSN5 160 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 DHFRP00374 187 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 IFNA6P05013 189 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 HLA-DMAP28067 261 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 KHDC1LQ5JSQ8 128 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 TPTE2P1Q5T6R2 138 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 ARRDC1Q8N5I2 433 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 GVQW1Q8N7I0 195 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 SUMF2Q8NBJ7 301 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 OR56B4Q8NH76 319 aa17.33■□□□□ 0.36
C9orf3-208ENST00000451893 CITED2Q99967 270 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms