RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 HDHD3Q9BSH5 251 aaPredicted RBP15.22■□□□□ 0.03
USP40-207ENST00000450940 PECRQ9BY49 303 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 Q9N2K0 584 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 NDUFB11Q9NX14 153 aa15.22■□□□□ 0.03
USP40-207ENST00000450940 TRDV1A0A1B0GX56 115 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 RAB29O14966 203 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 ATP6V1G2O95670 118 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 IGHG4P01861 327 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 ELANEP08246 267 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 GALP22466 123 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 HLA-DRB3P79483 266 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 MMDQ15546 238 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 PLAC9Q5JTB6 97 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 C8orf86Q6ZUL3 223 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 ZNF695Q8IW36 515 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 SETD6Q8TBK2 473 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 ARHGAP5-AS1Q96IT6 56 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 C12orf4Q9NQ89 552 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 RAB22AQ9UL26 194 aa15.21■□□□□ 0.03
USP40-207ENST00000450940 TMEM272A0A1B0GTI8 110 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 SHISA3A0PJX4 238 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 ST8SIA5O15466 376 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 DENRO43583 198 aaKnown RBP15.2■□□□□ 0.02
USP40-207ENST00000450940 HLA-DRB1P01911 266 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 RPLP1P05386 114 aaKnown RBP15.2■□□□□ 0.02
USP40-207ENST00000450940 ZBTB25P24278 435 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 CDX1P47902 265 aaPredicted RBP15.2■□□□□ 0.02
USP40-207ENST00000450940 KLHL30-AS1Q8NEE0 82 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 PTX4Q96A99 478 aa15.2■□□□□ 0.02
USP40-207ENST00000450940 PARP12Q9H0J9 701 aaKnown RBP15.2■□□□□ 0.02
USP40-207ENST00000450940 ZNF107Q9UII5 783 aaPredicted RBP15.2■□□□□ 0.02
USP40-207ENST00000450940 PDCD5O14737 125 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 NBR2O15453 112 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 NDUFA3O95167 84 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CT45A6P0DMU7 189 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CT45A5P0DMU8 189 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CT45A7P0DMV0 189 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CNTFRP26992 372 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 EGFEM1PQ0D2K5 195 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 PLA2G7Q13093 441 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CXorf66Q5JRM2 361 aaPredicted RBP15.19■□□□□ 0.02
USP40-207ENST00000450940 EDARADDQ8WWZ3 215 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 CMSS1Q9BQ75 279 aaKnown RBP15.19■□□□□ 0.02
USP40-207ENST00000450940 C11orf54Q9H0W9 315 aaPredicted RBP15.19■□□□□ 0.02
USP40-207ENST00000450940 KCNK7Q9Y2U2 307 aa15.19■□□□□ 0.02
USP40-207ENST00000450940 IFITM5A6NNB3 132 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 NUDT19A8MXV4 375 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 PROP1O75360 226 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 SCTP09683 121 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 OR5H8P0DN80 308 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 SLC2A2P11168 524 aaPredicted RBP15.18■□□□□ 0.02
USP40-207ENST00000450940 VDAC1P21796 283 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 PSMB8P28062 276 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 PPIFP30405 207 aaKnown RBP15.18■□□□□ 0.02
USP40-207ENST00000450940 CEACAM6P40199 344 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 KIR2DS1Q14954 304 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 C5orf64Q2M2E5 130 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 RPL39P5Q59GN2 51 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 HES5Q5TA89 166 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 UBE2UQ5VVX9 321 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 MRAPQ8TCY5 172 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 MYOZ3Q8TDC0 251 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 KCTD7Q96MP8 289 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 GPR61Q9BZJ8 451 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 TOLLIPQ9H0E2 274 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 OR1A1Q9P1Q5 309 aa15.18■□□□□ 0.02
USP40-207ENST00000450940 IGHV7-81A0A0B4J1V7 117 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 IGKV1-6A0A0C4DH72 117 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 OR5H14A6NHG9 310 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 TRDCB7Z8K6 153 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 MC5RP33032 325 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 OR10A3P58181 314 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 LIN54Q6MZP7 749 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 SPARTQ8N0X7 666 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 OR5AN1Q8NGI8 311 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 RAX2Q96IS3 184 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 ABHD14BQ96IU4 210 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 MCRIP2Q9BUT9 160 aaKnown RBP15.17■□□□□ 0.02
USP40-207ENST00000450940 YTHDF1Q9BYJ9 559 aaKnown RBP15.17■□□□□ 0.02
USP40-207ENST00000450940 OR51J1Q9H342 316 aa15.17■□□□□ 0.02
USP40-207ENST00000450940 CCL24O00175 119 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 RAB6AP20340 208 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 KRTAP10-11P60412 298 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 FAM131AQ6UXB0 335 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 LCNL1Q6ZST4 164 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 RAB3CQ96E17 227 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 RNF5Q99942 180 aa15.16■□□□□ 0.02
USP40-207ENST00000450940 H0YJW9 148 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 RAB27BO00194 218 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 HSPA12AO43301 675 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 RBBP9O75884 186 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 IGLV1-40P01703 118 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 RAB3BP20337 219 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 MYL9P24844 172 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 FGF9P31371 208 aaPredicted RBP15.15■□□□□ 0.02
USP40-207ENST00000450940 KIAA0141Q14154 515 aaPredicted RBP15.15■□□□□ 0.02
USP40-207ENST00000450940 MOGAT2Q3SYC2 334 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 NR2C2APQ86WQ0 139 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 OR4A4PQ8NGN8 299 aa15.15■□□□□ 0.02
USP40-207ENST00000450940 OR10R2Q8NGX6 335 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms