RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 A0A0U1RQV5 110 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 A6NDN8 102 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 RSPO4Q2I0M5 234 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 LDLRAD3Q86YD5 345 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 CEACAM18A8MTB9 384 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF735P0CB33 412 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 COX6A1P12074 109 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 NUBP1P53384 320 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 TWIST1Q15672 202 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 KLK13Q9UKR3 277 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 CEBPDP49716 269 aaPredicted RBP12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 FGF12P61328 243 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
RAPGEF3-205ENST00000449771 A0A1W2PPC1 479 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF253O75346 499 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 DLX1P56177 255 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 ELOBQ15370 118 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 HIST3H3Q16695 136 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 GGACTQ9BVM4 153 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 B4DEV8 164 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 CDS2O95674 445 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 MPV17P39210 176 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 SUCLG1P53597 346 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 FOXJ2Q9P0K8 574 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 ST6GALNAC2Q9UJ37 374 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 PLXNB2O15031 1838 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 HS3ST3B1Q9Y662 390 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 PPIAL4CA0A0B4J2A2 164 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 PLA2G10O15496 165 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 GCGP01275 180 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 PPIAL4GP0DN37 164 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM78Q5T7P6 136 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 HCP5Q6MZN7 132 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 PUSL1Q8N0Z8 303 aaKnown RBP12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 ATG101Q9BSB4 218 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
RAPGEF3-205ENST00000449771 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 SYT8Q8NBV8 401 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 DCTN5Q9BTE1 182 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM191AQ9H0A3 160 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 WNT9BO14905 357 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 KCNAB3O43448 404 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 APCSP02743 223 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 FCARP24071 287 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 PLP1P60201 277 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 C10orf111Q8N326 155 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR8G5Q8NG78 346 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 SFXN3Q9BWM7 321 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 NPIPB8E9PQR5 432 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 MAJINQ3KP22 176 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 MTURNQ8N3F0 131 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 TMEM74BQ9NUR3 256 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 LOC105371242A0A075B767 164 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 IGKV3D-15A0A087WSY6 115 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 TRBV5-3A0A0A0MS03 114 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 IGKV3-15P01624 115 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 HIST1H1BP16401 226 aaKnown RBP12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 GPA33Q99795 319 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
RAPGEF3-205ENST00000449771 LOC101059948A0A1B0GTJ6 334 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 ISLRO14498 428 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 NDUFA2O43678 99 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 PCSK4Q6UW60 755 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 FADS6Q8N9I5 356 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 MIXL1Q9H2W2 232 aa12.08□□□□□ -0.47
RAPGEF3-205ENST00000449771 IGHV3OR16-10A0A075B7F0 116 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 FAM181BA6NEQ2 426 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 TMEM229AB2RXF0 380 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 RAB24Q969Q5 203 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 HINT1P49773 126 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 PLAURQ03405 335 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 MYO7AQ13402 2215 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 CORTO00230 105 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 PGA5P0DJD9 388 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 COX19Q49B96 90 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 TMEM189A5PLL7 270 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 MPTX1A8MV57 137 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 PRSS23O95084 383 aa12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 NANOS3P60323 173 aaKnown RBP12.08□□□□□ -0.48
RAPGEF3-205ENST00000449771 LOC389332A0A1B0GUA5 103 aa12.07□□□□□ -0.48
RAPGEF3-205ENST00000449771 PITX3O75364 302 aa12.07□□□□□ -0.48
RAPGEF3-205ENST00000449771 NMBP08949 121 aa12.07□□□□□ -0.48
RAPGEF3-205ENST00000449771 C19orf54Q5BKX5 351 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms