RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 RPLP1P05386 114 aaKnown RBP12□□□□□ -0.49
CHD3-205ENST00000449744 OR5H8P0DN80 308 aa12□□□□□ -0.49
CHD3-205ENST00000449744 ZBTB25P24278 435 aa12□□□□□ -0.49
CHD3-205ENST00000449744 HLA-DRB3P79483 266 aa12□□□□□ -0.49
CHD3-205ENST00000449744 MRPS15P82914 257 aaKnown RBP12□□□□□ -0.49
CHD3-205ENST00000449744 FOXE3Q13461 319 aa12□□□□□ -0.49
CHD3-205ENST00000449744 HES5Q5TA89 166 aa12□□□□□ -0.49
CHD3-205ENST00000449744 EDARADDQ8WWZ3 215 aa12□□□□□ -0.49
CHD3-205ENST00000449744 ARHGAP5-AS1Q96IT6 56 aa12□□□□□ -0.49
CHD3-205ENST00000449744 CMSS1Q9BQ75 279 aaKnown RBP12□□□□□ -0.49
CHD3-205ENST00000449744 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
CHD3-205ENST00000449744 PECRQ9BY49 303 aa12□□□□□ -0.49
CHD3-205ENST00000449744 SLC23A1Q9UHI7 598 aa12□□□□□ -0.49
CHD3-205ENST00000449744 PRKDCP78527 4128 aaKnown RBP11.99□□□□□ -0.49
CHD3-205ENST00000449744 IGF1P05019 195 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 MYL9P24844 172 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 CEACAM6P40199 344 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 RAB25P57735 213 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 KCTD7Q96MP8 289 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 CHCHD6Q9BRQ6 235 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 GHITMQ9H3K2 345 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 Q9N2K0 584 aa11.99□□□□□ -0.49
CHD3-205ENST00000449744 FOXI3A8MTJ6 420 aaPredicted RBP11.98□□□□□ -0.49
CHD3-205ENST00000449744 CCL24O00175 119 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 ITGB1BP1O14713 200 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 SCTP09683 121 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 CNTFRP26992 372 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 CDX1P47902 265 aaPredicted RBP11.98□□□□□ -0.49
CHD3-205ENST00000449744 TMEM50BP56557 158 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 SSX1Q16384 188 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 LIN54Q6MZP7 749 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 LCNL1Q6ZST4 164 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 OR8U1Q8NH10 309 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 RITA1Q96K30 269 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 P2RX4Q99571 388 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 PARP11Q9NR21 331 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 OR1A1Q9P1Q5 309 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 RAB22AQ9UL26 194 aa11.98□□□□□ -0.49
CHD3-205ENST00000449744 TRAV1-2A0A0B4J238 106 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 TMEM272A0A1B0GTI8 110 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 OR5H14A6NHG9 310 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 H7C2Y5 167 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 IGHG4P01861 327 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 HLA-DRB1P01911 266 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 GSTP1P09211 210 aaKnown RBP11.97□□□□□ -0.49
CHD3-205ENST00000449744 CD3GP09693 182 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 HOXD3P31249 432 aaPredicted RBP11.97□□□□□ -0.49
CHD3-205ENST00000449744 MC5RP33032 325 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 GABARAPL2P60520 117 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 CFHR3Q02985 330 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 PLGLAQ15195 96 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 C5orf64Q2M2E5 130 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 PLAC9Q5JTB6 97 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 TMEM65Q6PI78 240 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 RNF152Q8N8N0 203 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 NPBQ8NG41 125 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 PARP12Q9H0J9 701 aaKnown RBP11.97□□□□□ -0.49
CHD3-205ENST00000449744 C11orf54Q9H0W9 315 aaPredicted RBP11.97□□□□□ -0.49
CHD3-205ENST00000449744 OR51J1Q9H342 316 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 ZNF221Q9UK13 617 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 WSB1Q9Y6I7 421 aa11.97□□□□□ -0.49
CHD3-205ENST00000449744 IGHV7-81A0A0B4J1V7 117 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 TRDV1A0A1B0GX56 115 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 TRDCB7Z8K6 153 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 LDLRAD4O15165 306 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 ATP6V0E1O15342 81 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 MRPS14O60783 128 aaKnown RBP11.96□□□□□ -0.49
CHD3-205ENST00000449744 ATP6V1G2O95670 118 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 CT45A6P0DMU7 189 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 CT45A5P0DMU8 189 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 CT45A7P0DMV0 189 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 RAB3BP20337 219 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 GADD45AP24522 165 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 OR10A3P58181 314 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 KIR2DS1Q14954 304 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 GLDNQ6ZMI3 551 aaPredicted RBP11.96□□□□□ -0.49
CHD3-205ENST00000449744 RAB3CQ96E17 227 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 AGMATQ9BSE5 352 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 Q9H521 79 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 WASHC3Q9Y3C0 194 aa11.96□□□□□ -0.49
CHD3-205ENST00000449744 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 IFITM5A6NNB3 132 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 H0YJW9 148 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 RBBP9O75884 186 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 NDUFA3O95167 84 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 GALP22466 123 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 PSMB8P28062 276 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 KRTAP10-11P60412 298 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 PLA2G7Q13093 441 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 DEFB121Q5J5C9 76 aa11.95□□□□□ -0.5
CHD3-205ENST00000449744 CD200R1LQ6Q8B3 271 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms