RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CABLES2Q9BTV7 478 aa11.25□□□□□ -0.61
GTF3C3-206ENST00000448539 GHITMQ9H3K2 345 aa11.25□□□□□ -0.61
GTF3C3-206ENST00000448539 RANBP3Q9H6Z4 567 aaPredicted RBP11.25□□□□□ -0.61
GTF3C3-206ENST00000448539 RDH8Q9NYR8 311 aa11.25□□□□□ -0.61
GTF3C3-206ENST00000448539 RBM7Q9Y580 266 aaKnown RBP11.25□□□□□ -0.61
GTF3C3-206ENST00000448539 IGHV3-72A0A0B4J1Y9 119 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 HPGDSO60760 199 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 IGKV1D-33P01593 117 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 IGKV1-33P01594 117 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 EIF4EP06730 217 aaKnown RBP11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 CTXN2P0C2S0 81 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 TMEM11P17152 192 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 TAS2R20P59543 309 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 HERPUD1Q15011 391 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 OR2T6Q8NHC8 308 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 CFHR4Q92496 578 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 PRSS22Q9GZN4 317 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 C11orf54Q9H0W9 315 aaPredicted RBP11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 IFI27L2Q9H2X8 130 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 MRPS7Q9Y2R9 242 aaKnown RBP11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 MMP24Q9Y5R2 645 aa11.24□□□□□ -0.61
GTF3C3-206ENST00000448539 SAA2-SAA4A0A096LPE2 208 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 TRBV6-7A0A0A0MS04 114 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 FAM90A9PA6NNJ1 464 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 M0QZK8 103 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 SSX5O60225 188 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 OR2F2O95006 317 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 SAA2P0DJI9 122 aaPredicted RBP11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 CD1BP29016 333 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 OR3A3P47888 321 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 ARPC4P59998 168 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 HNF4GQ14541 408 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 OR2T10Q8NGZ9 312 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 RBM14Q96PK6 669 aaKnown RBP11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 PARP12Q9H0J9 701 aaKnown RBP11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 ANXA10Q9UJ72 324 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 ADAM30Q9UKF2 790 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
GTF3C3-206ENST00000448539 IGKV1D-8A0A087WSZ0 117 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 H3BMQ9 156 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 RGS5O15539 181 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 PTHLHP12272 177 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 ELK1P19419 428 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 GPR12P47775 334 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 HABP2Q14520 560 aaPredicted RBP11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 CNIH2Q6PI25 160 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 HOGA1Q86XE5 327 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 ODF3L1Q8IXM7 274 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 BEST4Q8NFU0 473 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 MRPL20Q9BYC9 149 aaKnown RBP11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 TOLLIPQ9H0E2 274 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 CCDC59Q9P031 241 aaKnown RBP11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 RNF150Q9ULK6 438 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 MOB4Q9Y3A3 225 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 CEPT1Q9Y6K0 416 aa11.22□□□□□ -0.61
GTF3C3-206ENST00000448539 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 MOSP00540 346 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 OR8U9P0C7N5 309 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 PRSS3P35030 304 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 LSAMPQ13449 338 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 RPL39P5Q59GN2 51 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 SNX29P2Q8IUI4 249 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 OR8U1Q8NH10 309 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 DYNC2LI1Q8TCX1 351 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 EAF1Q96JC9 268 aaPredicted RBP11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 AGMATQ9BSE5 352 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 OR2D2Q9H210 308 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 EXTL2Q9UBQ6 330 aa11.21□□□□□ -0.61
GTF3C3-206ENST00000448539 MEIS3P1A6NDR6 274 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 PEX14O75381 377 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 FCER2P06734 321 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 BLCAPP62952 87 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 EBI3Q14213 229 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 ABCA11PQ4W5N1 156 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 C9orf152Q5JTZ5 239 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 H1FOOQ8IZA3 346 aaPredicted RBP11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 ZNF747Q9BV97 191 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 NECAP2Q9NVZ3 263 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 RSL24D1Q9UHA3 163 aaKnown RBP11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 SIGLEC9Q9Y336 463 aa11.2□□□□□ -0.62
GTF3C3-206ENST00000448539 ZNF736B4DX44 427 aaPredicted RBP11.19□□□□□ -0.62
GTF3C3-206ENST00000448539 HLA-DQB1P01920 261 aa11.19□□□□□ -0.62
GTF3C3-206ENST00000448539 NFYAP23511 347 aaPredicted RBP11.19□□□□□ -0.62
GTF3C3-206ENST00000448539 MC5RP33032 325 aa11.19□□□□□ -0.62
GTF3C3-206ENST00000448539 SHISA2Q6UWI4 295 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms