RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 C1orf147Q96MC9 270 aaPredicted RBP9.16□□□□□ -0.94
LINC00342-202ENST00000448494 RTN4RQ9BZR6 473 aa9.16□□□□□ -0.94
LINC00342-202ENST00000448494 FAM181BA6NEQ2 426 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 SLC22A20A6NK97 555 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 LATO43561 262 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 CNIH1O95406 144 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 SELPP16109 830 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 FBLP22087 321 aaKnown RBP9.15□□□□□ -0.94
LINC00342-202ENST00000448494 GPR183P32249 361 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 IER3P46695 156 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 ASTLQ6HA08 431 aaPredicted RBP9.15□□□□□ -0.94
LINC00342-202ENST00000448494 BRICD5Q6PL45 260 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 OR10G8Q8NGN5 311 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 OR10X1Q8NGY0 326 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 RNF133Q8WVZ7 376 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 DOCK9Q9BZ29 2069 aa9.15□□□□□ -0.94
LINC00342-202ENST00000448494 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.95
LINC00342-202ENST00000448494 PRR33A8MZF0 331 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 WNT10BO00744 389 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 PHF1O43189 567 aaPredicted RBP9.15□□□□□ -0.95
LINC00342-202ENST00000448494 TMEM50AO95807 157 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 PNMTP11086 282 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 P2RY2P41231 377 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 OR1D5P58170 312 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF585BQ52M93 769 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 KIAA2026Q5HYC2 2103 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF439Q8NDP4 499 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 ZNF296Q8WUU4 475 aaPredicted RBP9.15□□□□□ -0.95
LINC00342-202ENST00000448494 OR2A5Q96R48 311 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 CITED1Q99966 193 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 RAB1BQ9H0U4 201 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 TAC3Q9UHF0 121 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 EMC9Q9Y3B6 208 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 B3GALT1Q9Y5Z6 326 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 SPCS1Q9Y6A9 102 aa9.15□□□□□ -0.95
LINC00342-202ENST00000448494 A0A0G2JLM5 398 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SHISA7A6NL88 538 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 K7EQS6 105 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SLC25A6P12236 298 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 GATA3P23771 443 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 NTSR1P30989 418 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 MEF2CQ06413 473 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SPATA31B1PQ5VZV4 182 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SPATA12Q7Z6I5 190 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 MRPL43Q8N983 215 aaKnown RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 OR52E5Q8NH55 327 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 MS4A6AQ9H2W1 248 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 MS4A5Q9H3V2 200 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 C6orf106Q9H6K1 298 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 HES4Q9HCC6 221 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 FAM60AQ9NP50 221 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SCRT2Q9NQ03 307 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 CTXND1A0A1B0GTU2 59 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 A0A1W2PPV4 95 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 H3BUT2 72 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 H7C1C5 153 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 POU2F2P09086 479 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 USF1P22415 310 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 TGFBR3Q03167 851 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 EGR4Q05215 589 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SRSF6Q13247 344 aaKnown RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 LRRC75BQ2VPJ9 315 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 CXorf66Q5JRM2 361 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 LRRC25Q8N386 305 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SUMF1Q8NBK3 374 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 OR52N5Q8NH56 324 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 CT55Q8WUE5 264 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 SCAMP4Q969E2 229 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 ST6GALNAC6Q969X2 333 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 RNF183Q96D59 192 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 AICDAQ9GZX7 198 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 CENPMQ9NSP4 180 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 NECAP2Q9NVZ3 263 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 B4GALT6Q9UBX8 382 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 TBC1D29Q9UFV1 150 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 ANXA10Q9UJ72 324 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.14□□□□□ -0.95
LINC00342-202ENST00000448494 TIMM9Q9Y5J7 89 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
LINC00342-202ENST00000448494 ATG2AQ2TAZ0 1938 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 A0A1W2PPM0 123 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 H3BMH7 237 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CRXO43186 299 aaPredicted RBP9.13□□□□□ -0.95
LINC00342-202ENST00000448494 HLA-DQA2P01906 255 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 CELA3AP09093 270 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 NTF3P20783 257 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 NPPCP23582 126 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 HTR1DP28221 377 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 GPR12P47775 334 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 COL9A2Q14055 689 aaPredicted RBP9.13□□□□□ -0.95
LINC00342-202ENST00000448494 ADIPOQQ15848 244 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 KIF26BQ2KJY2 2108 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 TSPO2Q5TGU0 170 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 MARCH3Q86UD3 253 aa9.13□□□□□ -0.95
LINC00342-202ENST00000448494 FAM19A2Q8N3H0 131 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms