RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 MRPL20Q9BYC9 149 aaKnown RBP8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 SLC23A1Q9UHI7 598 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF221Q9UK13 617 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 V9GY05 133 aa8.64□□□□□ -1.03
NPIPB3-202ENST00000448012 SAA2-SAA4A0A096LPE2 208 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 NBR2O15453 112 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 ST8SIA5O15466 376 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 CD3GP09693 182 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 SAA2P0DJI9 122 aaPredicted RBP8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 CD40LGP29965 261 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 CEACAM6P40199 344 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 VEGFCP49767 419 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 F2RL1P55085 397 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 HLA-DRB3P79483 266 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 UNC119Q13432 240 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 TBCEQ15813 527 aaPredicted RBP8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF833PQ6ZTB9 187 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 FAM71E2Q8N5Q1 922 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 ABHD5Q8WTS1 349 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 FAM3DQ96BQ1 224 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 KCTD7Q96MP8 289 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 NABP2Q9BQ15 211 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 KCNK15Q9H427 330 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 PARP11Q9NR21 331 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 PLSCR3Q9NRY6 295 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 AK3Q9UIJ7 227 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 RAB22AQ9UL26 194 aa8.63□□□□□ -1.03
NPIPB3-202ENST00000448012 VWFP04275 2813 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 TRBV6-6A0A0A6YYG2 114 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 METTL21EPA6NDL7 271 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 OR5H14A6NHG9 310 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 LINC01548A6NM66 108 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 SOCS1O15524 211 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 RBBP9O75884 186 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 NAPSAO96009 420 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 IGHG4P01861 327 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 IGF1P05019 195 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 TALDO1P37837 337 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 MAP2K4P45985 399 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 OR3A3P47888 321 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 CDX1P47902 265 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 SERPINB10P48595 397 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 QRFPP83859 136 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 TMEM267Q0VDI3 215 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 CBX3Q13185 183 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 FAM131AQ6UXB0 335 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 TMEM91Q6ZNR0 172 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 LCNL1Q6ZST4 164 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 GPR141Q7Z602 305 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 FAM89BQ8N5H3 189 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 HSPB9Q9BQS6 159 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 CENPOQ9BU64 300 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 RBM38Q9H0Z9 239 aaKnown RBP8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 OR51J1Q9H342 316 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF580Q9UK33 172 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 RNF150Q9ULK6 438 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 WASHC3Q9Y3C0 194 aa8.62□□□□□ -1.03
NPIPB3-202ENST00000448012 TRAV41A0A0B4J266 112 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 MRPS14O60783 128 aaKnown RBP8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 HLA-DRB1P01911 266 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 APOA2P02652 100 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 CD37P11049 281 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 HOXD3P31249 432 aaPredicted RBP8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 CLDN12P56749 244 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 FABP5Q01469 135 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 KIR2DS1Q14954 304 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 ARL6IP1Q15041 203 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 C5orf64Q2M2E5 130 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 C2orf76Q3KRA6 126 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 HES5Q5TA89 166 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF880Q6PDB4 577 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 C4orf3Q8WVX3 66 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 RAB3CQ96E17 227 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 ARHGAP5-AS1Q96IT6 56 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 P2RX4Q99571 388 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 TSNAXQ99598 290 aaKnown RBP8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 RNF5Q99942 180 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 PECRQ9BY49 303 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 IFI27L2Q9H2X8 130 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 RBM7Q9Y580 266 aaKnown RBP8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 WSB1Q9Y6I7 421 aa8.61□□□□□ -1.03
NPIPB3-202ENST00000448012 TRAV1-2A0A0B4J238 106 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 CCDC160A6NGH7 325 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 TRDCB7Z8K6 153 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 RAMP3O60896 148 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 RAB3BP20337 219 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 DGCR2P98153 550 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 NEDD8Q15843 81 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 CNPY1Q3B7I2 92 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 C9orf66Q5T8R8 295 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 ZNF660Q6AZW8 331 aaPredicted RBP8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 ETV3LQ6ZN32 361 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 ODF3L1Q8IXM7 274 aa8.6□□□□□ -1.03
NPIPB3-202ENST00000448012 TCTEX1D1Q8N7M0 179 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms