RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 SPACA5Q96QH8 159 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 TM2D3Q9BRN9 247 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 VCX2Q9H322 139 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SEBOXQ9HB31 216 aaPredicted RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 HMG20AQ9NP66 347 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 RAB9BQ9NP90 201 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 TMEM140Q9NV12 185 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 RBFOX1Q9NWB1 397 aaKnown RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 NDUFB11Q9NX14 153 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 IL36GQ9NZH8 169 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 MTCH1Q9NZJ7 389 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 HSF4Q9ULV5 492 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 GSTK1Q9Y2Q3 226 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SIRT4Q9Y6E7 314 aaPredicted RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SMAD5-AS1Q9Y6J3 95 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 hADV38S2A0JD32 116 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 GABRPO00591 440 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 DEGS1O15121 323 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 SCGB2A1O75556 95 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 CRYGCP07315 174 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 UCHL1P09936 223 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 IGFBP3P17936 291 aaPredicted RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 SERPINA2P20848 420 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 MAP2K4P45985 399 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 EDDM3BP56851 147 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 RAB25P57735 213 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ZP1P60852 638 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 RPS11P62280 158 aaKnown RBP eCLIP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 RPL23AP62750 156 aaKnown RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 DYNC1I2Q13409 638 aaKnown RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 GRK1Q15835 563 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 DGUOKQ16854 277 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 MPV17LQ2QL34 196 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 DEFB136Q30KP8 78 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 UBE2UQ5VVX9 321 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ELP2Q6IA86 826 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 KCTD9Q7L273 389 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 OR2W3Q7Z3T1 314 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 TRAPPC6BQ86SZ2 158 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF329Q86UD4 541 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 FAM185AQ8N0U4 392 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 BATF2Q8N1L9 274 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 OSR2Q8N2R0 312 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ZNRF1Q8ND25 227 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 NUDT10Q8NFP7 164 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 OR5T1Q8NG75 326 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 OR6M1Q8NGM8 313 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 CD300LFQ8TDQ1 290 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 NEK7Q8TDX7 302 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 TMEM203Q969S6 136 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 NUDT11Q96G61 164 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 SPATA25Q9BR10 227 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 MCRIP2Q9BUT9 160 aaKnown RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 GAL3ST2Q9H3Q3 398 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 METTL8Q9H825 291 aaKnown RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 PLGRKTQ9HBL7 147 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 BATF3Q9NR55 127 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF222Q9UK12 451 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 SSR3Q9UNL2 185 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 ING4Q9UNL4 249 aa5.53□□□□□ -1.52
HDAC9-216ENST00000446646 MRPS28Q9Y2Q9 187 aaKnown RBP5.53□□□□□ -1.52
HDAC9-216ENST00000446646 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 TRAV8-7A0A075B6U6 113 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 TRGV10A0A0A0MS01 117 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 LOC105371267A0A1B0GV96 52 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 A0A1W2PPK0 400 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A10PA6NDY2 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A18PA6NE21 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A16PA6NEW6 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A20PA6NIJ5 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A8PA6NJQ4 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A7PA6NKC0 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A22PA8MWA6 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A12PA8MX19 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A5PA8MXJ8 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A23PA8MXZ1 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 K7N7A8 449 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 SIRPB1O00241 398 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 MGST3O14880 152 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 GATCO43716 136 aaKnown RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 SC5DO75845 299 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 OR7C1O76099 320 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 LY86O95711 162 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 LY6G6CO95867 125 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 OR2H2O95918 312 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 RBP4P02753 201 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 AMY1AP04745 511 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 CSN2P05814 226 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A15PP0C7V4 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A13PP0C7W8 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A14PP0C7W9 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 FAM90A24PP0C7X0 464 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 SRMP19623 302 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 CD24P25063 80 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 HTR2CP28335 458 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 OR3A4PP47883 348 aa5.52□□□□□ -1.53
HDAC9-216ENST00000446646 RBM11P57052 281 aaKnown RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 RPS25P62851 125 aaKnown RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 MEF2CQ06413 473 aaPredicted RBP5.52□□□□□ -1.53
HDAC9-216ENST00000446646 RBM39Q14498 530 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms