RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 MAFIPQ8WZ33 124 aa14.85□□□□□ -0.03
HDAC4-203ENST00000445704 ABHD14BQ96IU4 210 aa14.85□□□□□ -0.03
HDAC4-203ENST00000445704 S1PR3Q99500 378 aa14.85□□□□□ -0.03
HDAC4-203ENST00000445704 C11orf54Q9H0W9 315 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-203ENST00000445704 LIN7CQ9NUP9 197 aaKnown RBP14.85□□□□□ -0.03
HDAC4-203ENST00000445704 LINC00527Q9UJ94 153 aa14.85□□□□□ -0.03
HDAC4-203ENST00000445704 A0A087WXM4 84 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 A0A1W2PRX2 142 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 ITGB1BP1O14713 200 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 HSPA12AO43301 675 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 MRPS15P82914 257 aaKnown RBP14.84□□□□□ -0.03
HDAC4-203ENST00000445704 FAM71F2Q6NXP2 309 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 SLC35E3Q7Z769 313 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 FAM71E2Q8N5Q1 922 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 YIPF6Q96EC8 236 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 RITA1Q96K30 269 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 ABCG5Q9H222 651 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 PIPOXQ9P0Z9 390 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 ZNF230Q9UIE0 474 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-203ENST00000445704 MEGF8Q7Z7M0 2845 aa14.84□□□□□ -0.03
HDAC4-203ENST00000445704 PSMB11A5LHX3 300 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 SERPINE3A8MV23 424 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 RAB29O14966 203 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 FABP7O15540 132 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 GSTT2P0CG29 244 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 GSTT2BP0CG30 244 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 CNTFRP26992 372 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 GPR12P47775 334 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 IGSF11Q5DX21 431 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 ZNF329Q86UD4 541 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 OR8H1Q8NGG4 311 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 OR4A4PQ8NGN8 299 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 OR5H6Q8NGV6 325 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 CABLES2Q9BTV7 478 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 RDH8Q9NYR8 311 aa14.83□□□□□ -0.04
HDAC4-203ENST00000445704 TRIM64CA6NLI5 447 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 PROP1O75360 226 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 OPN1MWP04001 364 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 CT45A6P0DMU7 189 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 CT45A5P0DMU8 189 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 CT45A7P0DMV0 189 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 OPN1MW2P0DN77 364 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 OPN1MW3P0DN78 364 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 ACTBP60709 375 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 ARFRP1Q13795 201 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 FAM131AQ6UXB0 335 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 GLDNQ6ZMI3 551 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-203ENST00000445704 OR4X2Q8NGF9 303 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 EDARADDQ8WWZ3 215 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 R3HDM4Q96D70 268 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 SLC25A38Q96DW6 304 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 HSPB9Q9BQS6 159 aa14.82□□□□□ -0.04
HDAC4-203ENST00000445704 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.82□□□□□ -0.04
HDAC4-203ENST00000445704 IGKV1D-8A0A087WSZ0 117 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 TCRBV4S1A1TA0A5B7 111 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 KIR2DS1Q14954 304 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 MMDQ15546 238 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 CDNFQ49AH0 187 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 IDNKQ5T6J7 187 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 STPG2Q8N412 459 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 CHPT1Q8WUD6 406 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 RASL11BQ9BPW5 248 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 TOLLIPQ9H0E2 274 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 RHBDL2Q9NX52 303 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 RNF150Q9ULK6 438 aa14.81□□□□□ -0.04
HDAC4-203ENST00000445704 BET1O15155 118 aa14.8□□□□□ -0.04
HDAC4-203ENST00000445704 KCNAB3O43448 404 aa14.8□□□□□ -0.04
HDAC4-203ENST00000445704 C1QL4Q86Z23 238 aa14.8□□□□□ -0.04
HDAC4-203ENST00000445704 FOXRED2Q8IWF2 684 aa14.8□□□□□ -0.04
HDAC4-203ENST00000445704 VCX3AQ9NNX9 186 aa14.8□□□□□ -0.04
HDAC4-203ENST00000445704 TSSC4Q9Y5U2 329 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-203ENST00000445704 TRBV6-7A0A0A0MS04 114 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 TMEM235A6NFC5 223 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 H0YJW9 148 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 AIREO43918 545 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 TALDO1P37837 337 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 SERPINB10P48595 397 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 LINC00205P59089 165 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 LSM3P62310 102 aaKnown RBP14.79□□□□□ -0.04
HDAC4-203ENST00000445704 DEFA6Q01524 100 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 ARL6IP1Q15041 203 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 TIMM50Q3ZCQ8 353 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 ZNF260Q3ZCT1 412 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 KHDC1LQ5JSQ8 128 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 HACD4Q5VWC8 232 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 DRAXINQ8NBI3 349 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-203ENST00000445704 OR4F17Q8NGA8 305 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 NUDCD2Q8WVJ2 157 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 OR4F4Q96R69 305 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 GHITMQ9H3K2 345 aa14.79□□□□□ -0.04
HDAC4-203ENST00000445704 AP4M1O00189 453 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 NBR2O15453 112 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 WIPF1O43516 503 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 SSX5O60225 188 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 DTYMKP23919 212 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 SOX6P35712 828 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 SCAND1P57086 179 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 SRSF7Q16629 238 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC4-203ENST00000445704 Q6ZS49 121 aa14.78□□□□□ -0.04
HDAC4-203ENST00000445704 OR10J5Q8NHC4 309 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms