RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 APOA1P02647 267 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 CTXN2P0C2S0 81 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 PROK1P58294 105 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 HES1Q14469 280 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 MZT2AQ6P582 158 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 Q8N2B8 174 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 OR2T6Q8NHC8 308 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 NUDCD2Q8WVJ2 157 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 MAFIPQ8WZ33 124 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 S1PR3Q99500 378 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 AGMATQ9BSE5 352 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 ST6GALNAC5Q9BVH7 336 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 C11orf54Q9H0W9 315 aaPredicted RBP9.45□□□□□ -0.9
HSPG2-206ENST00000439717 AUNIPQ9H7T9 357 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 RDH8Q9NYR8 311 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 COMMD3Q9UBI1 195 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 DNHD1Q96M86 4753 aa9.45□□□□□ -0.9
HSPG2-206ENST00000439717 SAA2-SAA4A0A096LPE2 208 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 BET1O15155 118 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 NOL3O60936 208 aaKnown RBP9.44□□□□□ -0.9
HSPG2-206ENST00000439717 IGKV1D-33P01593 117 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 IGKV1-33P01594 117 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 SAA2P0DJI9 122 aaPredicted RBP9.44□□□□□ -0.9
HSPG2-206ENST00000439717 TMEM11P17152 192 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 SOX6P35712 828 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 CBX5P45973 191 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 FBLN7Q53RD9 439 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 IGSF11Q5DX21 431 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 TMEM69Q5SWH9 247 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 CNIH2Q6PI25 160 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 OR2T10Q8NGZ9 312 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 WFDC12Q8WWY7 111 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 GINS4Q9BRT9 223 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 MOB4Q9Y3A3 225 aa9.44□□□□□ -0.9
HSPG2-206ENST00000439717 TENM1Q9UKZ4 2725 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 STAB1Q9NY15 2570 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 IGKV1D-8A0A087WSZ0 117 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 SMIM31A0A1B0GVY4 71 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 FGF16O43320 207 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 MOSP00540 346 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 EIF4EP06730 217 aaKnown RBP9.43□□□□□ -0.9
HSPG2-206ENST00000439717 OR3A3P47888 321 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 TAS2R20P59543 309 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 BLCAPP62952 87 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 LSAMPQ13449 338 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 SPCS2Q15005 226 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 Q8N6K4 173 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-206ENST00000439717 OR8H1Q8NGG4 311 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 EAF1Q96JC9 268 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-206ENST00000439717 NABP2Q9BQ15 211 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 ZNF251Q9BRH9 671 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 MRPL20Q9BYC9 149 aaKnown RBP9.43□□□□□ -0.9
HSPG2-206ENST00000439717 PARP12Q9H0J9 701 aaKnown RBP9.43□□□□□ -0.9
HSPG2-206ENST00000439717 ANXA10Q9UJ72 324 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 ZNF221Q9UK13 617 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 GAB2Q9UQC2 676 aa9.43□□□□□ -0.9
HSPG2-206ENST00000439717 IGHV3-72A0A0B4J1Y9 119 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 HAX1O00165 279 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 HPGDSO60760 199 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 AMY1AP04745 511 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 AMY2AP04746 511 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 GPR12P47775 334 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-206ENST00000439717 BEST4Q8NFU0 473 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 ABHD14BQ96IU4 210 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 RNF150Q9ULK6 438 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
HSPG2-206ENST00000439717 OR5H14A6NHG9 310 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ZNF736B4DX44 427 aaPredicted RBP9.41□□□□□ -0.9
HSPG2-206ENST00000439717 TPPPO94811 219 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 OR8U9P0C7N5 309 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CT45A6P0DMU7 189 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CT45A5P0DMU8 189 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CT45A7P0DMV0 189 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ELK1P19419 428 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 MC5RP33032 325 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 PRSS3P35030 304 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ARPC4P59998 168 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 HNF4GQ14541 408 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ABCA11PQ4W5N1 156 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 RPL39P5Q59GN2 51 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
HSPG2-206ENST00000439717 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 OR8U1Q8NH10 309 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 DYNC2LI1Q8TCX1 351 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 ISOC1Q96CN7 298 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CITED1Q99966 193 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 SERTAD4Q9NUC0 356 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
HSPG2-206ENST00000439717 CEPT1Q9Y6K0 416 aa9.41□□□□□ -0.9
HSPG2-206ENST00000439717 FAM25AB3EWG3 89 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 FAM25CB3EWG5 89 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 FAM25GB3EWG6 89 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 H3BMQ9 156 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 PEX14O75381 377 aa9.4□□□□□ -0.9
HSPG2-206ENST00000439717 HLA-DQB1P01920 261 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms