RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 OR4F17Q8NGA8 305 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 EDARADDQ8WWZ3 215 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 NOL4LQ96MY1 436 aaPredicted RBP19.02■□□□□ 0.64
CPNE1-217ENST00000439669 OR4F4Q96R69 305 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 S1PR3Q99500 378 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 RASL11BQ9BPW5 248 aa19.02■□□□□ 0.64
CPNE1-217ENST00000439669 A0A087WXM4 84 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 IGHG2P01859 326 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 CLEC2LP0C7M8 214 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 SNRPBP14678 240 aaKnown RBP19.01■□□□□ 0.63
CPNE1-217ENST00000439669 RPL39P5Q59GN2 51 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 TCTEX1D4Q5JR98 221 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 FAM71F2Q6NXP2 309 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 FOXRED2Q8IWF2 684 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 TSPAN14Q8NG11 270 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 LGALS14Q8TCE9 139 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 CHPT1Q8WUD6 406 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 ABHD14BQ96IU4 210 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 CENPOQ9BU64 300 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 ABCG5Q9H222 651 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 PLSCR3Q9NRY6 295 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 LINC00527Q9UJ94 153 aa19.01■□□□□ 0.63
CPNE1-217ENST00000439669 IGKV1-6A0A0C4DH72 117 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 ITGB1BP1O14713 200 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 FABP7O15540 132 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 TALDO1P37837 337 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 GPR12P47775 334 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 F2RL1P55085 397 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 KIR2DS1Q14954 304 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 MMDQ15546 238 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 ZNF329Q86UD4 541 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 OR4A4PQ8NGN8 299 aa19■□□□□ 0.63
CPNE1-217ENST00000439669 C11orf54Q9H0W9 315 aaPredicted RBP19■□□□□ 0.63
CPNE1-217ENST00000439669 TSSC4Q9Y5U2 329 aaPredicted RBP19■□□□□ 0.63
CPNE1-217ENST00000439669 ARL6IP1Q15041 203 aa18.99■□□□□ 0.63
CPNE1-217ENST00000439669 TIMM50Q3ZCQ8 353 aa18.99■□□□□ 0.63
CPNE1-217ENST00000439669 MAFIPQ8WZ33 124 aa18.99■□□□□ 0.63
CPNE1-217ENST00000439669 ZNF230Q9UIE0 474 aaPredicted RBP18.99■□□□□ 0.63
CPNE1-217ENST00000439669 PF4V1P10720 104 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 ACTBP60709 375 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 DEFA6Q01524 100 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 FAM71E2Q8N5Q1 922 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 ZNF251Q9BRH9 671 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 GHITMQ9H3K2 345 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 RDH8Q9NYR8 311 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 RNF150Q9ULK6 438 aa18.98■□□□□ 0.63
CPNE1-217ENST00000439669 LINC01548A6NM66 108 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 AP4M1O00189 453 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 BET1O15155 118 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 KCNAB3O43448 404 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 SOX6P35712 828 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 SERPINB10P48595 397 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 SLC35B1P78383 322 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 IDNKQ5T6J7 187 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 FAM131AQ6UXB0 335 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 C1QL4Q86Z23 238 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 STPG2Q8N412 459 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 PHF21AQ96BD5 680 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 AGMATQ9BSE5 352 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 ZNF221Q9UK13 617 aa18.97■□□□□ 0.63
CPNE1-217ENST00000439669 SCGNO76038 276 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 GSTT2P0CG29 244 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 GSTT2BP0CG30 244 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 CDNFQ49AH0 187 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 IGSF11Q5DX21 431 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 GLDNQ6ZMI3 551 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-217ENST00000439669 HSPB9Q9BQS6 159 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 CABLES2Q9BTV7 478 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 RHBDL2Q9NX52 303 aa18.96■□□□□ 0.63
CPNE1-217ENST00000439669 ELF5Q9UKW6 265 aaPredicted RBP18.96■□□□□ 0.63
CPNE1-217ENST00000439669 CT45A6P0DMU7 189 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 CT45A5P0DMU8 189 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 CT45A7P0DMV0 189 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 CNTFRP26992 372 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 OR10J5Q8NHC4 309 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 RITA1Q96K30 269 aa18.95■□□□□ 0.62
CPNE1-217ENST00000439669 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.95■□□□□ 0.621e-7■■■■□ 24.8
CPNE1-217ENST00000439669 ZNF107Q9UII5 783 aaPredicted RBP18.95■□□□□ 0.62
CPNE1-217ENST00000439669 VWFP04275 2813 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 OR5H14A6NHG9 310 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 H7C2Y5 167 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 NBR2O15453 112 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 RRP9O43818 475 aaKnown RBP18.94■□□□□ 0.62
CPNE1-217ENST00000439669 AIREO43918 545 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 OR5H6Q8NGV6 325 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 YIPF6Q96EC8 236 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 GINS4Q9BRT9 223 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 KIAA1456Q9P272 454 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 ETV7Q9Y603 341 aa18.94■□□□□ 0.62
CPNE1-217ENST00000439669 TMEM235A6NFC5 223 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 H0YJW9 148 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 DTYMKP23919 212 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 SCAND1P57086 179 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 HACD4Q5VWC8 232 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 COMMD1Q8N668 190 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 DRAXINQ8NBI3 349 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-217ENST00000439669 GON7Q9BXV9 100 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 WASHC3Q9Y3C0 194 aa18.93■□□□□ 0.62
CPNE1-217ENST00000439669 TRBV6-7A0A0A0MS04 114 aa18.92■□□□□ 0.62
CPNE1-217ENST00000439669 DIRAS3O95661 229 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms