RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 NPBQ8NG41 125 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 OR8U1Q8NH10 309 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 MYOZ3Q8TDC0 251 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 MGLLQ99685 303 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 HDHD3Q9BSH5 251 aaPredicted RBP15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 SLC23A1Q9UHI7 598 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 HSF4Q9ULV5 492 aa15.87■□□□□ 0.13
NCKIPSD-206ENST00000439518 TMEM50BP56557 158 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 FABP5Q01469 135 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 RAB11BQ15907 218 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 SETD6Q8TBK2 473 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 C4orf3Q8WVX3 66 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 AGMATQ9BSE5 352 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 CCDC90BQ9GZT6 254 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 OR51J1Q9H342 316 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 PIPOXQ9P0Z9 390 aa15.86■□□□□ 0.13
NCKIPSD-206ENST00000439518 IGHV7-81A0A0B4J1V7 117 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 ITGB1BP1O14713 200 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 RAB29O14966 203 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 NDUFA3O95167 84 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 CT45A6P0DMU7 189 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 CT45A5P0DMU8 189 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 CT45A7P0DMV0 189 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 MAP2K4P45985 399 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 KIAA0141Q14154 515 aaPredicted RBP15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 RPL39P5Q59GN2 51 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 DEFB121Q5J5C9 76 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 FAM131AQ6UXB0 335 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 ACOT13Q9NPJ3 140 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 WSB1Q9Y6I7 421 aa15.85■□□□□ 0.13
NCKIPSD-206ENST00000439518 G3V318 75 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 ATP6V0E1O15342 81 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 IGLV1-40P01703 118 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 CLDN12P56749 244 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 RAB25P57735 213 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 HLA-DRB3P79483 266 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 FHL3Q13643 280 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 LIN54Q6MZP7 749 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 ARHGAP5-AS1Q96IT6 56 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 KLK15Q9H2R5 256 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 GHITMQ9H3K2 345 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 Q9N2K0 584 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 C12orf4Q9NQ89 552 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 OR1A1Q9P1Q5 309 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 MGAT4AQ9UM21 535 aa15.84■□□□□ 0.13
NCKIPSD-206ENST00000439518 LDLRAD4O15165 306 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 C2orf76Q3KRA6 126 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR5M8Q8NGP6 311 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 FAM3DQ96BQ1 224 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 ABHD14BQ96IU4 210 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 PECRQ9BY49 303 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 C11orf54Q9H0W9 315 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 VCX3BQ9H321 246 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 PARP11Q9NR21 331 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 KIAA1456Q9P272 454 aa15.83■□□□□ 0.12
NCKIPSD-206ENST00000439518 TRAV41A0A0B4J266 112 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR5H14A6NHG9 310 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 H0YJW9 148 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 SCTP09683 121 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 ZBTB25P24278 435 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 MC5RP33032 325 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 CEACAM6P40199 344 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 VEGFCP49767 419 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 TBCEQ15813 527 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 C19orf54Q5BKX5 351 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 PLAC9Q5JTB6 97 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 IZUMO2Q6UXV1 221 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 MINDY2Q8NBR6 621 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR5AN1Q8NGI8 311 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 PTX4Q96A99 478 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 UBE2E2Q96LR5 201 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 ZMAT5Q9UDW3 170 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 V9GY05 133 aa15.82■□□□□ 0.12
NCKIPSD-206ENST00000439518 RRHO14718 337 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 PROP1O75360 226 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 HSPA13P48723 471 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 PSMD7P51665 324 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 LUMP51884 338 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 CRIP2P52943 208 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 DGCR2P98153 550 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 NDPQ00604 133 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 RUNX1Q01196 453 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 SSX1Q16384 188 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 TMEM65Q6PI78 240 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 ZNF491Q8N8L2 437 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 OR56B1Q8NGI3 324 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 EDARADDQ8WWZ3 215 aa15.81■□□□□ 0.12
NCKIPSD-206ENST00000439518 TENM3Q9P273 2699 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 IGKV1-6A0A0C4DH72 117 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 I3L521 148 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 HSPA12AO43301 675 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 DENRO43583 198 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 RANBP1P43487 201 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 PLA2G7Q13093 441 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 ZNF660Q6AZW8 331 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 GLDNQ6ZMI3 551 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 ZNF367Q7RTV3 350 aa15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 CMSS1Q9BQ75 279 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-206ENST00000439518 FBXL15Q9H469 300 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms