RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C17orf100A8MU93 164 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF705EA8MWA4 302 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-216ENST00000437340 KIAA1324LA8MWY0 1029 aaPredicted RBP21.39■■□□□ 1.01
CPNE1-216ENST00000437340 IGKV1-5P01602 117 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 IRF2P14316 349 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 CA7P43166 264 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 ASCL1P50553 236 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF66Q6ZN08 573 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 GINS3Q9BRX5 216 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 WFDC1Q9HC57 220 aa21.39■■□□□ 1.01
CPNE1-216ENST00000437340 F2RL2O00254 374 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 CHST1O43916 411 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 SEC11BP0C7V7 166 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 MUC1P15941 1255 aaPredicted RBP21.38■■□□□ 1.01
CPNE1-216ENST00000437340 EPHA1P21709 976 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 BAXQ07812 192 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 TEX36Q5VZQ5 186 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 CLEC9AQ6UXN8 241 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 TMEM252Q8N6L7 170 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 C5orf30Q96GV9 206 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 AGMATQ9BSE5 352 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 FAM234AQ9H0X4 552 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 IGSF23A1L1A6 192 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 RAB40CQ96S21 281 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 COA4Q9NYJ1 87 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 CACNG5Q9UF02 275 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 NUP50Q9UKX7 468 aa21.38■■□□□ 1.01
CPNE1-216ENST00000437340 YPEL1O60688 119 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 ATG12O94817 140 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 LPAR6P43657 344 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 BLOC1S1P78537 153 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 CACNA1DQ01668 2161 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 FAM209AQ5JX71 171 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 FAM53AQ6NSI3 398 aaPredicted RBP21.37■■□□□ 1.01
CPNE1-216ENST00000437340 Q6ZRM9 215 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 YPEL2Q96QA6 119 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 ESRP2Q9H6T0 727 aaKnown RBP21.37■■□□□ 1.01
CPNE1-216ENST00000437340 MMP24Q9Y5R2 645 aa21.37■■□□□ 1.01
CPNE1-216ENST00000437340 IGHV3-43A0A0B4J1X8 118 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 LGALS8O00214 317 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 FBXO24O75426 580 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 CYB5R3P00387 301 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-216ENST00000437340 IGHV3-43DP0DP04 118 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 FAM201AQ5SY85 155 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 STPG2Q8N412 459 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 FGFRL1Q8N441 504 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF808Q8N4W9 903 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-216ENST00000437340 HSD17B10Q99714 261 aaKnown RBP21.36■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF665Q9H7R5 613 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 LRRC30A6NM36 301 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 TMEM50AO95807 157 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 CGB3P0DN86 165 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 CGB7P0DN87 165 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 EDDM3BP56851 147 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 RPL30P62888 115 aaKnown RBP21.36■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF266Q14584 549 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 NCMAPQ5T1S8 102 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 ADAM5Q6NVV9 412 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 MMP26Q9NRE1 261 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 GNG12Q9UBI6 72 aa21.36■■□□□ 1.01
CPNE1-216ENST00000437340 FAM90A26D6RGX4 464 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 SPP1P10451 314 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 PAX9P55771 341 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 MST1LQ2TV78 715 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 FBXL19-AS1Q494R0 122 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 MORN2Q502X0 79 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 IL34Q6ZMJ4 242 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 ZNF788Q6ZQV5 615 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 GAFA1Q96PS6 74 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 PSG11Q9UQ72 335 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 WSB1Q9Y6I7 421 aa21.35■■□□□ 1.01
CPNE1-216ENST00000437340 CLDN1O95832 211 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 RPL23AP62750 156 aaKnown RBP21.34■■□□□ 1.01
CPNE1-216ENST00000437340 TUSC1Q2TAM9 212 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 EGLN1Q9GZT9 426 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 PARP11Q9NR21 331 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 CALYQ9NYX4 217 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 LAMP3Q9UQV4 416 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 KALRNO60229 2985 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 IGSF10Q6WRI0 2623 aa21.34■■□□□ 1.01
CPNE1-216ENST00000437340 ITGB1BP1O14713 200 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 MED6O75586 246 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 LOXL3P58215 753 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 CCL8P80075 99 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 PXDC1Q5TGL8 231 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 TCTEX1D2Q8WW35 142 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 CACNA1BQ00975 2339 aa21.33■■□□□ 1.01
CPNE1-216ENST00000437340 NBASA2RRP1 2371 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 DEFB108AA8MXU0 73 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 SHISA9B4DS77 424 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 ST8SIA5O15466 376 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 SYNGR2O43760 224 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 TLE1Q04724 770 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 ODF3L1Q8IXM7 274 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 SPAG16Q8N0X2 631 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 PLA2G2EQ9NZK7 142 aa21.33■■□□□ 1
CPNE1-216ENST00000437340 SMG1Q96Q15 3661 aaKnown RBP21.32■■□□□ 1
CPNE1-216ENST00000437340 CCL21O00585 134 aa21.32■■□□□ 1
CPNE1-216ENST00000437340 TOR1AO14656 332 aa21.32■■□□□ 1
CPNE1-216ENST00000437340 RAMP3O60896 148 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms