RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 HERPUD1Q15011 391 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
TREX1-201ENST00000433541 GVQW1Q8N7I0 195 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 BEST4Q8NFU0 473 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 SLC25A33Q9BSK2 321 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 CABLES2Q9BTV7 478 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
TREX1-201ENST00000433541 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
TREX1-201ENST00000433541 PIPOXQ9P0Z9 390 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 RSL24D1Q9UHA3 163 aaKnown RBP12.47□□□□□ -0.41
TREX1-201ENST00000433541 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 CEPT1Q9Y6K0 416 aa12.47□□□□□ -0.41
TREX1-201ENST00000433541 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 J3QRK9 145 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 CHST1O43916 411 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 CTXN2P0C2S0 81 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 PRSS3P35030 304 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 OR3A3P47888 321 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 AWAT1Q58HT5 328 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 RNASE12Q5GAN4 147 aaKnown RBP12.46□□□□□ -0.41
TREX1-201ENST00000433541 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 CCBE1Q6UXH8 406 aaPredicted RBP12.46□□□□□ -0.41
TREX1-201ENST00000433541 DYNC2LI1Q8TCX1 351 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 DCUN1D5Q9BTE7 237 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 C11orf54Q9H0W9 315 aaPredicted RBP12.46□□□□□ -0.41
TREX1-201ENST00000433541 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 ANXA10Q9UJ72 324 aa12.46□□□□□ -0.41
TREX1-201ENST00000433541 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 HAX1O00165 279 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 LANCL1O43813 399 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 PEX14O75381 377 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 RELBQ01201 579 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 CNIH2Q6PI25 160 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 Q6ZS49 121 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 OR8U1Q8NH10 309 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 OR2T6Q8NHC8 308 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 MRPL20Q9BYC9 149 aaKnown RBP12.45□□□□□ -0.42
TREX1-201ENST00000433541 OR2D2Q9H210 308 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 IFI27L2Q9H2X8 130 aa12.45□□□□□ -0.42
TREX1-201ENST00000433541 NCBP2LA6PVI3 153 aaKnown RBP12.44□□□□□ -0.42
TREX1-201ENST00000433541 NDUFA7O95182 113 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 ZNF137PP52743 207 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 Q6ZSV7 163 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 C16orf82Q7Z2V1 217 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 HOGA1Q86XE5 327 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 OR2T10Q8NGZ9 312 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 SPATA3Q8NHX4 192 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 MCFD2Q8NI22 146 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 CFHR4Q92496 578 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 GHITMQ9H3K2 345 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 RNF114Q9Y508 228 aa12.44□□□□□ -0.42
TREX1-201ENST00000433541 A0A1B0GUS0 222 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 H7C2Y5 167 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 CTDSP2O14595 271 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 OR2F2O95006 317 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 DIRAS3O95661 229 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 NFYAP23511 347 aaPredicted RBP12.43□□□□□ -0.42
TREX1-201ENST00000433541 CD1BP29016 333 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 ZNF833PQ6ZTB9 187 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 THNSL2Q86YJ6 484 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 LAX1Q8IWV1 398 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 ODF3L1Q8IXM7 274 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
TREX1-201ENST00000433541 RANBP3Q9H6Z4 567 aaPredicted RBP12.43□□□□□ -0.42
TREX1-201ENST00000433541 MOB4Q9Y3A3 225 aa12.43□□□□□ -0.42
TREX1-201ENST00000433541 CLPSL1A2RUU4 121 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 M0R1X1 148 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 MOSP00540 346 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 LUMP51884 338 aaPredicted RBP12.42□□□□□ -0.42
TREX1-201ENST00000433541 LSAMPQ13449 338 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 ABCA11PQ4W5N1 156 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 FAM71F2Q6NXP2 309 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 H1FOOQ8IZA3 346 aaPredicted RBP12.42□□□□□ -0.42
TREX1-201ENST00000433541 DRAXINQ8NBI3 349 aaPredicted RBP12.42□□□□□ -0.42
TREX1-201ENST00000433541 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 EHFQ9NZC4 300 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 STAB1Q9NY15 2570 aa12.42□□□□□ -0.42
TREX1-201ENST00000433541 ZNF736B4DX44 427 aaPredicted RBP12.41□□□□□ -0.42
TREX1-201ENST00000433541 M0QZK8 103 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 TSPAN9O75954 239 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 APOA2P02652 100 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 COMPP49747 757 aaPredicted RBP12.41□□□□□ -0.42
TREX1-201ENST00000433541 TAS2R46P59540 309 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 IL18Q14116 193 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 CDK10Q15131 360 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 FBLN7Q53RD9 439 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 FAM131AQ6UXB0 335 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 GLDNQ6ZMI3 551 aaPredicted RBP12.41□□□□□ -0.42
TREX1-201ENST00000433541 OR5AP2Q8NGF4 316 aa12.41□□□□□ -0.42
TREX1-201ENST00000433541 LINC01006Q8NI28 216 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms