RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ABHD5Q8WTS1 349 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 ELOVL1Q9BW60 279 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 IFI27L2Q9H2X8 130 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 STEAP1Q9UHE8 339 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 CLEC2DQ9UHP7 191 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 NUBP2Q9Y5Y2 271 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 A3GALT2U3KPV4 340 aa11.47□□□□□ -0.57
PRKDC-203ENST00000432581 RAB29O14966 203 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 HSPA12AO43301 675 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 RBBP9O75884 186 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 MC5RP33032 325 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 HMGN3Q15651 99 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 SRSF7Q16629 238 aaKnown RBP eCLIP11.46□□□□□ -0.57
PRKDC-203ENST00000432581 LRRC36Q1X8D7 754 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 AKIRIN2Q53H80 203 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 ACTBL2Q562R1 376 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 ZFP41Q8N8Y5 198 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 CASTOR1Q8WTX7 329 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 THRSPQ92748 146 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 ISOC1Q96CN7 298 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 TMEM80Q96HE8 168 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 NEDD4LQ96PU5 975 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 DERL3Q96Q80 235 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 SLA2Q9H6Q3 261 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 STUB1Q9UNE7 303 aa11.46□□□□□ -0.57
PRKDC-203ENST00000432581 RYR2Q92736 4967 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 A8MZ25 164 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 BAG2O95816 211 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 IGHV3-11P01762 117 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 GSTP1P09211 210 aaKnown RBP11.45□□□□□ -0.58
PRKDC-203ENST00000432581 CT45A6P0DMU7 189 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 CT45A5P0DMU8 189 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 CT45A7P0DMV0 189 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 IGHV4-30-4P0DP06 118 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 EGR2P11161 476 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-203ENST00000432581 MAPK3P27361 379 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-203ENST00000432581 C5orf24Q7Z6I8 188 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 PPP1R27Q86WC6 154 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 SGPP2Q8IWX5 399 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 PQLC1Q8N2U9 271 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 ZNF485Q8NCK3 441 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 FAM46BQ96A09 425 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 RNF5Q99942 180 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 SMPD3Q9NY59 655 aaPredicted RBP11.45□□□□□ -0.58
PRKDC-203ENST00000432581 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
PRKDC-203ENST00000432581 H0YJW9 148 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 FCN1O00602 326 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 ST8SIA5O15466 376 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 UBBP0CG47 229 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 TPPP2P59282 170 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 RPL39P5Q59GN2 51 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 ANKRD13BQ86YJ7 626 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 CYYR1Q96J86 154 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 RHOVQ96L33 236 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 LYSTQ99698 3801 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 SULT4A1Q9BR01 284 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 S100A14Q9HCY8 104 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 C19orf73Q9NVV2 129 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 CNOT2Q9NZN8 540 aaKnown RBP11.44□□□□□ -0.58
PRKDC-203ENST00000432581 WASHC3Q9Y3C0 194 aa11.44□□□□□ -0.58
PRKDC-203ENST00000432581 PNMA8CA0A1B0GUJ8 204 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 H7C2Y5 167 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 ITGB1BP1O14713 200 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 IGLV1-51P01701 117 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 TFAP2AP05549 437 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 CD1AP06126 327 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 ZP3P21754 424 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 VEGFCP49767 419 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 MOB1BQ7L9L4 216 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 Q8N1Y9 231 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 SVOPQ8N4V2 548 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 LFNGQ8NES3 379 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 MS4A10Q96PG2 267 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 FAM103A1Q9BTL3 118 aaKnown RBP11.43□□□□□ -0.58
PRKDC-203ENST00000432581 FAAP24Q9BTP7 215 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 EDA2RQ9HAV5 297 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
PRKDC-203ENST00000432581 METTL1Q9UBP6 276 aaKnown RBP11.43□□□□□ -0.58
PRKDC-203ENST00000432581 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 CSMD3Q7Z407 3707 aa11.43□□□□□ -0.58
PRKDC-203ENST00000432581 SLC22A1O15245 554 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 SPDEFO95238 335 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 NAPSAO96009 420 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 TRGV3P03979 118 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 ST3GAL4Q11206 333 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 ZNF880Q6PDB4 577 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 GLDNQ6ZMI3 551 aaPredicted RBP11.42□□□□□ -0.58
PRKDC-203ENST00000432581 C6orf201Q7Z4U5 140 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 SETD9Q8NE22 299 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
PRKDC-203ENST00000432581 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 RSRP1Q9BUV0 290 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 TMEM59Q9BXS4 323 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms