RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 NBEAL1Q6ZS30 2694 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 PI4KAP42356 2102 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 ANKHD1Q8IWZ3 2542 aaKnown RBP1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 HIVEP1P15822 2718 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 PTPRBP23467 1997 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 PCDH15Q96QU1 1955 aa1.67□□□□□ -2.14
HMGB1P27-201ENST00000431429 NBASA2RRP1 2371 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPENQ96T58 3664 aaKnown RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 PDZD2O15018 2839 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SPTY2D1-AS1A0A0U1RR47 76 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 LOC389332A0A1B0GUA5 103 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 LINC00854A0A1B0GVQ3 168 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 IZUMO1RA6ND01 250 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 RBFOX3A6NFN3 312 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ERICH4A6NGS2 130 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CEACAM18A8MTB9 384 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 D6RAR5 112 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 UPK2O00526 184 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SCN2BO60939 215 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 DHRS3O75911 302 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2A4O95047 310 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 RLN2P04090 185 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SEC11BP0C7V7 166 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 NQO2P16083 231 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF14P17017 642 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 M6PRP20645 277 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 TSPOP30536 169 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 LGALS7P47929 136 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CCL7P80098 99 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 STX4Q12846 297 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 TPBGQ13641 420 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 BSXQ3C1V8 233 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CEACAM21Q3KPI0 293 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ATP6AP1LQ52LC2 224 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SDHAF4Q5VUM1 108 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMEM215Q68D42 235 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 UGT2A3Q6UWM9 527 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 FA2HQ7L5A8 372 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 MRPL52Q86TS9 123 aaKnown RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 GKN2Q86XP6 184 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 PDPNQ86YL7 162 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 BLIDQ8IZY5 108 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZNF561Q8N587 486 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ZDHHC22Q8N966 263 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 DRAXINQ8NBI3 349 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR5H2Q8NGV7 314 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 LMX1AQ8TE12 382 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2M4Q96R27 311 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 OR2A7Q96R45 310 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 BEX2Q9BXY8 128 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CXCL16Q9H2A7 254 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 DHX35Q9H5Z1 703 aaKnown RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMBIM4Q9HC24 238 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 ABCB9Q9NP78 766 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 TMEM38BQ9NVV0 291 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CFAP45Q9UL16 551 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 SNX24Q9Y343 169 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 MUC22E2RYF6 1773 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 PRR14LQ5THK1 2151 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 RP1L1Q8IWN7 2480 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 UTP20O75691 2785 aaKnown RBP1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 CRYBG3Q68DQ2 2970 aa1.66□□□□□ -2.14
HMGB1P27-201ENST00000431429 FAM92AA1XBS5 289 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 GMNCA6NCL1 334 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 GOLGA6L4A6NEF3 574 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 C21orf140B9A014 251 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 C9JQL5 133 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 MFNGO00587 321 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 SLC31A1O15431 190 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 MYO1DO94832 1006 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 CA2P00918 260 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 CD5P06127 495 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 CDK1P06493 297 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 GIMD1P0DJR0 217 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 CXCL8P10145 99 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 AQP5P55064 265 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 SRSF6Q13247 344 aaKnown RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR4D1Q15615 310 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 SSX1Q16384 188 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 DEFB133Q30KQ1 61 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 TMEM69Q5SWH9 247 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 C9orf64Q5T6V5 341 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 PRR9Q5T870 116 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 LCE3AQ5TA76 89 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 HBMQ6B0K9 141 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZNF470Q6ECI4 717 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 AHSA2Q719I0 299 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 TRMT10CQ7L0Y3 403 aaKnown RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 CYP4Z1Q86W10 505 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 OR8A1Q8NGG7 326 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 ANGPTL6Q8NI99 470 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 PHF10Q8WUB8 498 aaKnown RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 BLNKQ8WV28 456 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 ITLN2Q8WWU7 325 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 RMI2Q96E14 147 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 ZMYND19Q96E35 227 aaPredicted RBP1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 FMC1Q96HJ9 113 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 PEBP4Q96S96 227 aa1.65□□□□□ -2.15
HMGB1P27-201ENST00000431429 SUCNR1Q9BXA5 334 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms