RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 THBS3P49746 956 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 LHX2P50458 406 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 GNB1P62873 340 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 SPATA45Q537H7 98 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 UNQ5815/PRO19632Q6UWF5 114 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 BAGE2Q86Y30 109 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 GAL3ST2Q9H3Q3 398 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 METTL7AQ9H8H3 244 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 DHHO43323 396 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 TUSC2O75896 110 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 IGHV4-34P06331 123 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 CRISP2P16562 243 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 ATP5G3P48201 142 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 HLA-BQ31612 363 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 LYG1Q8N1E2 194 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 SGCZQ96LD1 299 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 TECTBQ96PL2 329 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 UCN2Q96RP3 112 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 ZNF703Q9H7S9 590 aaPredicted RBP9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 WIPI2Q9Y4P8 454 aa9.42□□□□□ -0.9
SEMA4D-209ENST00000429836 HS3ST1O14792 307 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 VENTXO95231 258 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 BCL3P20749 454 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 TFF3Q07654 80 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 Q6ZN92 141 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 ADPRHL1Q8NDY3 354 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 CADM4Q8NFZ8 388 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 OR6C1Q96RD1 312 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 TXN2Q99757 166 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 TMEM204Q9BSN7 226 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 GPR27Q9NS67 375 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 ERRFI1Q9UJM3 462 aaPredicted RBP9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 CLDN1O95832 211 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 CARD18P57730 90 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 TMEM240Q5SV17 173 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 C20orf204Q6ZNR8 217 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 AGBL5Q8NDL9 886 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 UBALD1Q8TB05 177 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 PPP1R3CQ9UQK1 317 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 HS3ST3A1Q9Y663 406 aa9.41□□□□□ -0.9
SEMA4D-209ENST00000429836 EML6Q6ZMW3 1958 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 COL6A3P12111 3177 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 TRAV39A0A0B4J263 110 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 DIRC3C9JPN6 131 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 CRYGSP22914 178 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 PTGDSP41222 190 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 ARL4DP49703 201 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 BLKP51451 505 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 Q8N976 141 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 IL1F10Q8WWZ1 152 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 PSMF1Q92530 271 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 ULBP2Q9BZM5 246 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 ZNF552Q9H707 407 aaPredicted RBP9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 WDFY4Q6ZS81 3184 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 ABCA7Q8IZY2 2146 aa9.4□□□□□ -0.9
SEMA4D-209ENST00000429836 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 LOC102725191A0A1B0GVB3 256 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 ITGB1BP1O14713 200 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 LINC01565O15544 149 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 PIAS2O75928 621 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 S100A7P31151 101 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 CDKN1BP46527 198 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 FUT6P51993 359 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 PSG4Q00888 419 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 ERASQ7Z444 233 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 RABEPKQ7Z6M1 372 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 OR2M3Q8NG83 312 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 SFRP2Q96HF1 295 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 CCDC74BQ96LY2 380 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 IL36GQ9NZH8 169 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 SDK2Q58EX2 2172 aa9.4□□□□□ -0.91
SEMA4D-209ENST00000429836 MUC3AQ02505 3323 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 KLF3P57682 345 aaPredicted RBP9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 SUMO1P63165 101 aaKnown RBP9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 FOXL1Q12952 345 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 C10orf128Q5T292 105 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 TMEM42Q69YG0 159 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 PCSK4Q6UW60 755 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 LMX1AQ8TE12 382 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 APH1AQ96BI3 265 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 DMDP11532 3685 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 TRBV20OR9-2A0A075B6H5 130 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 SLC17A3O00476 420 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 HYPMO75409 117 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 CTRLP40313 264 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 SLC25A53Q5H9E4 307 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 KMT5CQ86Y97 462 aa9.39□□□□□ -0.91
SEMA4D-209ENST00000429836 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms