RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 PRDX2P32119 198 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 UBA52P62987 128 aaKnown RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 EXOSC2Q13868 293 aaKnown RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TMEM249Q2WGJ8 235 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 OR8H3Q8N146 312 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 BVESQ8NE79 360 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 OR10V1Q8NGI7 309 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 IL22RA2Q969J5 263 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 GALMQ96C23 342 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 MSI2Q96DH6 328 aaKnown RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 CCL13Q99616 98 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TMEM222Q9H0R3 208 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 MBD2Q9UBB5 411 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 UBE2J1Q9Y385 318 aaPredicted RBP12.93□□□□□ -0.34
SHOX2-202ENST00000425436 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
SHOX2-202ENST00000425436 ABCA2Q9BZC7 2435 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 A0A1B0GW55 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 TNFRSF13BO14836 293 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 BCL2L11O43521 198 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 PSPNO60542 156 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 FSTL3O95633 263 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 HEXAP06865 529 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L2P0CJ85 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L3P0CJ86 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L4P0CJ87 422 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L5P0CJ88 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L6P0CJ89 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L7P0CJ90 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 MUC1P15941 1255 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 ATXN7L3Q14CW9 347 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4L9Q6RFH8 374 aaPredicted RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 TBC1D26Q86UD7 250 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 ZBTB34Q8NCN2 500 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 FAM216AQ8WUB2 273 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DCUN1D4Q92564 292 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 SNX22Q96L94 193 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 NCOR1P1Q9H4R4 102 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 PATZ1Q9HBE1 687 aaKnown RBP12.92□□□□□ -0.34
SHOX2-202ENST00000425436 TAF9BQ9HBM6 251 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 RAB9BQ9NP90 201 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DUX4Q9UBX2 424 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 DOCK11Q5JSL3 2073 aa12.92□□□□□ -0.34
SHOX2-202ENST00000425436 ABCA1O95477 2261 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 ADAM20O43506 726 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 IGHV4-31P0DP07 118 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 PSG2P11465 335 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 GZMHP20718 246 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 GABRA2P47869 451 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
SHOX2-202ENST00000425436 COL10A1Q03692 680 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 MSMO1Q15800 293 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 SP6Q3SY56 376 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 ZNF818PQ6ZRF7 136 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 IL1F10Q8WWZ1 152 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 F8P00451 2351 aa12.91□□□□□ -0.34
SHOX2-202ENST00000425436 CSPG4Q6UVK1 2322 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 IGKV1D-17A0A075B6S4 117 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 H0Y980 276 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 TMPRSS2O15393 492 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 PGLYRP1O75594 196 aaPredicted RBP12.9□□□□□ -0.34
SHOX2-202ENST00000425436 CDS2O95674 445 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 KRBOX4Q5JUW0 171 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 STUMQ69YW2 141 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 OR5D13Q8NGL4 314 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 SCARB1Q8WTV0 552 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 RAB39BQ96DA2 213 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 PHYHIPLQ96FC7 376 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 AQP10Q96PS8 301 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 ARPC5LQ9BPX5 153 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 DNTTIP1Q9H147 329 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 GSX1Q9H4S2 264 aaPredicted RBP12.9□□□□□ -0.34
SHOX2-202ENST00000425436 CCL28Q9NRJ3 127 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 PRR13Q9NZ81 148 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 CTSZQ9UBR2 303 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 MIOXQ9UGB7 285 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 KIF25Q9UIL4 384 aa12.9□□□□□ -0.34
SHOX2-202ENST00000425436 IGKV1D-13A0A0B4J2D9 117 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 RNF212BA8MTL3 300 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 MPTX1A8MV57 137 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 HSD17B6O14756 317 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 TAAR5O14804 337 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 MGST3O14880 152 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 IGKV1-13P0DP09 117 aa12.89□□□□□ -0.35
SHOX2-202ENST00000425436 SELLP14151 372 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms