RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 MFNGO00587 321 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 FABP7O15540 132 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 AMY1AP04745 511 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 AMY2AP04746 511 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 FCGR3AP08637 254 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 SCTP09683 121 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 CLEC2LP0C7M8 214 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 SAA2P0DJI9 122 aaPredicted RBP8.7□□□□□ -1.02
USP49-204ENST00000423567 CD28P10747 220 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 OR3A3P47888 321 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 LSAMPQ13449 338 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 Q6ZPA2 131 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 ZNF833PQ6ZTB9 187 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 SLC35E3Q7Z769 313 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 FOXRED2Q8IWF2 684 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 OR4X2Q8NGF9 303 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 RASL11BQ9BPW5 248 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 IFI27L2Q9H2X8 130 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 RNF167Q9H6Y7 350 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 LIN7CQ9NUP9 197 aaKnown RBP8.7□□□□□ -1.02
USP49-204ENST00000423567 OR1A1Q9P1Q5 309 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 KCNK7Q9Y2U2 307 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 ETV7Q9Y603 341 aa8.7□□□□□ -1.02
USP49-204ENST00000423567 ZNF736B4DX44 427 aaPredicted RBP8.69□□□□□ -1.02
USP49-204ENST00000423567 BET1O15155 118 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 DIRAS3O95661 229 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 OPN1MWP04001 364 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 OPN1MW2P0DN77 364 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 OPN1MW3P0DN78 364 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 GNG2P59768 71 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 SLC35B1P78383 322 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 PITPNAQ00169 270 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 MMDQ15546 238 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 NSUN5P1Q3KNT7 163 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 ODF3L1Q8IXM7 274 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 Q8N6K4 173 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 OR10J5Q8NHC4 309 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 FAM110DQ8TAY7 271 aaPredicted RBP8.69□□□□□ -1.02
USP49-204ENST00000423567 CHPT1Q8WUD6 406 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 ABHD14BQ96IU4 210 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 NABP2Q9BQ15 211 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 ZNF251Q9BRH9 671 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 GINS4Q9BRT9 223 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 MRPL20Q9BYC9 149 aaKnown RBP8.69□□□□□ -1.02
USP49-204ENST00000423567 C11orf54Q9H0W9 315 aaPredicted RBP8.69□□□□□ -1.02
USP49-204ENST00000423567 RHBDL2Q9NX52 303 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 RDH8Q9NYR8 311 aa8.69□□□□□ -1.02
USP49-204ENST00000423567 TCRBV4S1A1TA0A5B7 111 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 PSMB11A5LHX3 300 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 OR5H14A6NHG9 310 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 KCNAB3O43448 404 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 TSPAN15O95858 294 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 GSTP1P09211 210 aaKnown RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 DTYMKP23919 212 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 GPR12P47775 334 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 LSM3P62310 102 aaKnown RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 SRSF7Q16629 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP49-204ENST00000423567 PNLIPRP3Q17RR3 467 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 RPL39P5Q59GN2 51 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 KHDC1LQ5JSQ8 128 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 HACD4Q5VWC8 232 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 WIPF2Q8TF74 440 aaPredicted RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 MAFIPQ8WZ33 124 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 YIPF6Q96EC8 236 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 OR4F4Q96R69 305 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 CITED2Q99967 270 aaPredicted RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 CABLES2Q9BTV7 478 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 GON7Q9BXV9 100 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.68□□□□□ -1.026e-7■■■■□ 25.9
USP49-204ENST00000423567 DIABLOQ9NR28 239 aa8.68□□□□□ -1.02
USP49-204ENST00000423567 ZNF230Q9UIE0 474 aaPredicted RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 RBM7Q9Y580 266 aaKnown RBP8.68□□□□□ -1.02
USP49-204ENST00000423567 TRBV6-7A0A0A0MS04 114 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 A0A0A6YYH2 397 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 IGKV1-6A0A0C4DH72 117 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 A6NJ64 397 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 TRIM64CA6NLI5 447 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 H7C2Y5 167 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 AP4M1O00189 453 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 IGHG2P01859 326 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 CTXN2P0C2S0 81 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 GSTT2BP0CG30 244 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 MC5RP33032 325 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 SOX6P35712 828 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 ACTBP60709 375 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 IGSF11Q5DX21 431 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 Q6ZS49 121 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 COMMD1Q8N668 190 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 Q8N9W7 124 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 OR5H6Q8NGV6 325 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 R3HDM4Q96D70 268 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 AGMATQ9BSE5 352 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 ST6GALNAC5Q9BVH7 336 aa8.67□□□□□ -1.02
USP49-204ENST00000423567 PARP12Q9H0J9 701 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms