RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 CMSS1Q9BQ75 279 aaKnown RBP6.83□□□□□ -1.32
MDC1-204ENST00000422266 PLSCR3Q9NRY6 295 aa6.83□□□□□ -1.32
MDC1-204ENST00000422266 NDUFB11Q9NX14 153 aa6.83□□□□□ -1.32
MDC1-204ENST00000422266 ZNF107Q9UII5 783 aaPredicted RBP6.83□□□□□ -1.32
MDC1-204ENST00000422266 SCOCQ9UIL1 159 aa6.83□□□□□ -1.32
MDC1-204ENST00000422266 ZNF221Q9UK13 617 aa6.83□□□□□ -1.32
MDC1-204ENST00000422266 RNF150Q9ULK6 438 aa6.83□□□□□ -1.32
MDC1-204ENST00000422266 NOTCH1P46531 2555 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 SAA2-SAA4A0A096LPE2 208 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 TRDV1A0A1B0GX56 115 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 SH2D7A6NKC9 451 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 IFITM5A6NNB3 132 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 NBR2O15453 112 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 IGHG4P01861 327 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 HLA-DRB1P01911 266 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 TFAP2AP05549 437 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 GSTP1P09211 210 aaKnown RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 CD3GP09693 182 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 SAA2P0DJI9 122 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 RAB3BP20337 219 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 CD40LGP29965 261 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 CEACAM6P40199 344 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 CDX1P47902 265 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 ALDH3B2P48448 385 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 THBS3P49746 956 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 VEGFCP49767 419 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 ACTBP60709 375 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 CBX3Q13185 183 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 PLGLAQ15195 96 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 SRSF7Q16629 238 aaKnown RBP eCLIP6.82□□□□□ -1.32
MDC1-204ENST00000422266 C2orf76Q3KRA6 126 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 UBE2UQ5VVX9 321 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 LIN54Q6MZP7 749 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 TPRA1Q86W33 373 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 KLHL30-AS1Q8NEE0 82 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 NPBQ8NG41 125 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 OR4A4PQ8NGN8 299 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 MRAPQ8TCY5 172 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 RAB3CQ96E17 227 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 NOL4LQ96MY1 436 aaPredicted RBP6.82□□□□□ -1.32
MDC1-204ENST00000422266 NABP2Q9BQ15 211 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 NICN1Q9BSH3 213 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 Q9N2K0 584 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 AK3Q9UIJ7 227 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 MEGF8Q7Z7M0 2845 aa6.82□□□□□ -1.32
MDC1-204ENST00000422266 TRDCB7Z8K6 153 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 SOCS1O15524 211 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 TMEM127O75204 238 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 NDUFA3O95167 84 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 SPDEFO95238 335 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 APOA2P02652 100 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 FGF9P31371 208 aaPredicted RBP6.81□□□□□ -1.32
MDC1-204ENST00000422266 TALDO1P37837 337 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 F2RL1P55085 397 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 GNMTQ14749 295 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 C5orf64Q2M2E5 130 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 FOXB2Q5VYV0 432 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 ZNF660Q6AZW8 331 aaPredicted RBP6.81□□□□□ -1.32
MDC1-204ENST00000422266 PYHIN1Q6K0P9 492 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 ODF3L1Q8IXM7 274 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 LINC00482Q8N8I6 264 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 OR5M8Q8NGP6 311 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 OR10J5Q8NHC4 309 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 ARHGAP5-AS1Q96IT6 56 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 TSNAXQ99598 290 aaKnown RBP6.81□□□□□ -1.32
MDC1-204ENST00000422266 PECRQ9BY49 303 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 MRPL20Q9BYC9 149 aaKnown RBP6.81□□□□□ -1.32
MDC1-204ENST00000422266 IFI27L2Q9H2X8 130 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 OR51J1Q9H342 316 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 SSR3Q9UNL2 185 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 WASHC3Q9Y3C0 194 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 VWFP04275 2813 aa6.81□□□□□ -1.32
MDC1-204ENST00000422266 A0A0A6YYD4 124 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 TMEM272A0A1B0GTI8 110 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 FOXI3A8MTJ6 420 aaPredicted RBP6.8□□□□□ -1.32
MDC1-204ENST00000422266 ZNF736B4DX44 427 aaPredicted RBP6.8□□□□□ -1.32
MDC1-204ENST00000422266 H7C2Y5 167 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 CCL24O00175 119 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 LDLRAD4O15165 306 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 ST8SIA5O15466 376 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 RAMP3O60896 148 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 SLC2A2P11168 524 aaPredicted RBP6.8□□□□□ -1.32
MDC1-204ENST00000422266 IGLL1P15814 213 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 PSMB9P28065 219 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 TMEM50BP56557 158 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 SCAND1P57086 179 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 PITPNAQ00169 270 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 SSX1Q16384 188 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 HES5Q5TA89 166 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 HIST2H2BDQ6DRA6 164 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 C10orf99Q6UWK7 81 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 PDPNQ86YL7 162 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 MRPL41Q8IXM3 137 aaKnown RBP6.8□□□□□ -1.32
MDC1-204ENST00000422266 OR5AN1Q8NGI8 311 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 OR10R2Q8NGX6 335 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 C4orf3Q8WVX3 66 aa6.8□□□□□ -1.32
MDC1-204ENST00000422266 UBE2E2Q96LR5 201 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms