RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 AKIRIN2Q53H80 203 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 LYPD6Q86Y78 171 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR14A2Q96R54 314 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 ELOVL1Q9BW60 279 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 IFI27L2Q9H2X8 130 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 EXOSC1Q9Y3B2 195 aaKnown RBP12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 EPPK1P58107 5090 aaKnown RBP12.96□□□□□ -0.34
UPF3AP3-201ENST00000420996 A0A1W2PPK0 400 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 IGHV3-11P01762 117 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 MC5RP33032 325 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 CAPGP40121 348 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 VEGFCP49767 419 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 PLGLAQ15195 96 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 HMGN3Q15651 99 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 ACTBL2Q562R1 376 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 PPP1R27Q86WC6 154 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 ABHD5Q8WTS1 349 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 RHOVQ96L33 236 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 ABRACLQ9P1F3 81 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 CLEC2DQ9UHP7 191 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 STUB1Q9UNE7 303 aa12.95□□□□□ -0.34
UPF3AP3-201ENST00000420996 OR5H14A6NHG9 310 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 RAB29O14966 203 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 BAG2O95816 211 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 IGLV1-51P01701 117 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 GSTP1P09211 210 aaKnown RBP12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 CT45A6P0DMU7 189 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 CT45A5P0DMU8 189 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 CT45A7P0DMV0 189 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 CD40LGP29965 261 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 UNQ5815/PRO19632Q6UWF5 114 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 SGPP2Q8IWX5 399 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZFP41Q8N8Y5 198 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZNF485Q8NCK3 441 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 MS4A10Q96PG2 267 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 DERL3Q96Q80 235 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 RNF5Q99942 180 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 UQCC2Q9BRT2 126 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 GHRLQ9UBU3 117 aa12.94□□□□□ -0.34
UPF3AP3-201ENST00000420996 H0YJW9 148 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 RBBP9O75884 186 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 TPPP2P59282 170 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 MED21Q13503 144 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 RPL39P5Q59GN2 51 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZNF562Q6V9R5 426 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 ANKRD13BQ86YJ7 626 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 C10orf67Q8IYJ2 551 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 NKAIN3Q8N8D7 197 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZNF555Q8NEP9 628 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 IL1F10Q8WWZ1 152 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 FAM46BQ96A09 425 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 NEDD4LQ96PU5 975 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 FAM103A1Q9BTL3 118 aaKnown RBP12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 SLC23A1Q9UHI7 598 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 GAB2Q9UQC2 676 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 WASHC3Q9Y3C0 194 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 BIRC6Q9NR09 4857 aa12.93□□□□□ -0.34
UPF3AP3-201ENST00000420996 H7C2Y5 167 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 TFAP2AP05549 437 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 GLDNQ6ZMI3 551 aaPredicted RBP12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 HAPLN4Q86UW8 402 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 LFNGQ8NES3 379 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 TMEM80Q96HE8 168 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 CLCC1Q96S66 551 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 SPATA25Q9BR10 227 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 FAAP24Q9BTP7 215 aa12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 METTL1Q9UBP6 276 aaKnown RBP12.92□□□□□ -0.34
UPF3AP3-201ENST00000420996 ITGB1BP1O14713 200 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 TRGV3P03979 118 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZP3P21754 424 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 TAS2R43P59537 309 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 ADAMTSL5Q6ZMM2 481 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 RSRP1Q9BUV0 290 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 RANGRFQ9HD47 186 aaPredicted RBP12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
UPF3AP3-201ENST00000420996 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 NAPSAO96009 420 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 CD1AP06126 327 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 UBBP0CG47 229 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 PSG5Q15238 335 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 C6orf201Q7Z4U5 140 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 PQLC1Q8N2U9 271 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 THRSPQ92748 146 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 AGMATQ9BSE5 352 aa12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 SMPD3Q9NY59 655 aaPredicted RBP12.9□□□□□ -0.34
UPF3AP3-201ENST00000420996 SLC22A1O15245 554 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms